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共表达簇以下为：C242型

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完整id:C242_acute_软骨细胞_myelodysplastic_c粒细胞_biphenotype_Fibroblast_stomach



第一阶段CAGE峰值

Hg19:：chr10:11894144..11894162+电话：chr10:11894144..11894162
+
Hg19:：chr10:134257886..134257894+p5@C10或91
Hg19:：chr10:91731546..91731549+电话：chr10:91731546..91731549
+
Hg19:：chr11:86133182..86133185+电话：chr11:86133182..86133185
+
Hg19:：chr12:117102463..117102470+电话：chr12:117102463..117102470
+
Hg19:：chr13:28620069..28620072-电话：chr13:28620069…28620072
-
Hg19:：chr13:28813645.28813656+第25页@PAN3
Hg19:：chr13:51484041..51484052+p8@RNASEH2B
Hg19:：chr15:99819658..99819672+电话：chr15:99819658..99819672
+
Hg19:：chr16:61278581..61278587-电话：chr16:61278581..61278587
-
Hg19:：chr16:85887504..85887515+p@chr16:85887504..85887515
+
Hg19:：chr16:85887549..85887557+电话：chr16:85887549..85887557
+
Hg19:：chr17:37865499..37865505+电话：chr17:37865499..37865505
+
Hg19:：chr17:37865552..3786557+电话：chr17:37865552..3786557
+
Hg19:：chr17:67044013..67044015+电话：chr17:67044013..67044015
+
Hg19:：chr17:80626054..80626077-电话：chr17:80626054..80626077
-
Hg19:：chr18:74846147..74846167-电话：chr18:74846147..74846167
-
Hg19:：chr19:843314..843331+p4@PRTN3
Hg19:：chr1:108093162..108093168-电话：chr1:108093162..1080933168
-
Hg19:：chr1:72566627..72566642-p10@NEGR1（负1）
Hg19:：chr1:91123303..91123309+p1@ENST00000362796
Hg19:：chr20:9491247..9491276+电话：chr20:9491247…9491276
+
Hg19:：chr20:9491287..9491294+电话：chr20:9491287…9491294
+
Hg19:：chr2:225342557.22534264+电话：chr2:22534257..22534264
+
Hg19:：chr2:22534265..22534281+电话：chr2:22534265..22534281
+
Hg19:：chr2:22534311..22534316+电话：chr2:22534311..22534316
+
Hg19:：chr2:22534322..22534329+电话：chr2:22534322..22534329
+
Hg19:：chr3:128578615..128578626-电话：chr3:128578615..128578626
-
Hg19:：chr3:18020939..18020953+电话：chr3:18020939..18020953
+
Hg19:：chr3:18020966..18020978+电话：chr3:18020966..18020978
+
Hg19:：chr3:18020982..18021001+电话：chr3:18020982..18021001
+
Hg19:：chr3:18021007..18021028+电话：chr3:18021007..18021028
+
Hg19:：chr3:18110143..18110146+电话：chr3:18110143..18110146
+
Hg19:：chr3:18178615..18178618+p@基督3:18178615.18178618
+
Hg19:：chr3:18344317..18344322+电话：chr3:18344317..18344322
+
Hg19:：chr4:47432804..47432808-电话：chr4:47432804..47432808
-
Hg19:：chr4:47443248..47443256-电话：chr4:47443248..47443256
-
Hg19:：chr4:47445162..47445167-p@chr4:7445162.47445167
-
Hg19:：chr4:47445183..47445188-电话：chr4:47445183..47445188
-
Hg19:：chr4:47445237..47445246-电话：chr4:47445237..47445246
-
Hg19:：chr5:120617659..120617660+电话：chr5:120617659..120617660
+
Hg19:：chr5:164566956..164566970+电话：chr5:164566956..164566970
+
Hg19:：chr6:14657070..14657092-电话：chr6:14657070..14657092
-
Hg19:：chr6:4890245..4890276+第18页@CDYL
Hg19:：chr6:5034746..5034769-电话：chr6:5034746..5034769
-
Hg19:：chr7:1548199..1548208-电话：chr7:1548199..1548208
-
Hg19:：基督7:1548370..1548414-电话：chr7:1548370..1548414
-
Hg19:：chr7:43150627..43150647+电话：chr7:43150627..43150647
+
Hg19:：chr7:73634762..73634776+p5@拉丁美洲2
Hg19:：chr8:121737322..121737328+电话：chr8:121737322..121737328
+
Hg19:：chr8:143591583.143591596+电话：chr8:143591583..143591596
+
Hg19:：chr8:144488686..144488699+电话：chr8:144488686..144488699
+
Hg19:：chr8:144488798..144488834+电话：chr8:144488798..144488834
+
Hg19:：chr9:139927093..139927113+p7@C9或139
Hg19:：chr9:214096..214121+电话：chr9:214096..214121
+
Hg19:：chr9:96717629..96717644-p1@BARX1


此共表达簇上的丰富路径<b>摘要：典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路，转录调控基因（下游靶点）是从Netpath获得的。综合起来，典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后，采用Benjamini-Hochberg方法对所得P值进行调整，以进行多重比较<br><b>分析师：Emmanuel Dimont链接到源数据集数据

此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要：共表达簇的GOStat分析结果。使用GOStat（PMID:14962934）和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师：Erik Arner链接到源数据集数据

GO标识GO名称FDR校正的p值
GO:0043303号肥大细胞脱颗粒0.0426517274003166
去：0002448肥大细胞介导的免疫0.0426517274003166
GO:0045576号肥大细胞激活0.0426517274003166
GO:0043299号白细胞脱颗粒0.0426517274003166
去：0002444髓系白细胞介导的免疫0.0426517274003166
GO:0050853号B细胞受体信号通路0.0426517274003166
GO:0043285号生物聚合物分解代谢过程0.0426517274003166
GO:0042169号SH2域绑定0.0426517274003166
GO:0030178号Wnt受体信号通路的负调控0.0426517274003166
去：0030574胶原蛋白分解代谢过程0.0426517274003166
GO:0044259号多细胞生物大分子代谢过程0.0426517274003166
GO:0044268号多细胞生物蛋白质代谢过程0.0426517274003166
GO:0044256号蛋白质消化0.0426517274003166
转到：0044254多细胞生物蛋白质分解代谢过程0.0426517274003166
GO:0044266号多细胞有机大分子分解代谢过程0.0426517274003166
去：0000184mRNA分解代谢过程，非传感介导的衰变0.0426517274003166
GO:0044243号多细胞生物分解代谢过程0.0426517274003166
去：0032963胶原蛋白代谢过程0.0426517274003166
GO:0044236号多细胞生物代谢过程0.0426517274003166
去：0005694染色体0.0426517274003166
去：0004468赖氨酸N-乙酰转移酶活性0.0426517274003166
去：0004402组蛋白乙酰转移酶活性0.0426517274003166
GO:0030111号Wnt受体信号通路的调控0.0426517274003166
去：0002274髓系白细胞活化0.0426517274003166
去：0050851抗原受体介导的信号通路0.0426517274003166
去：0006402mRNA分解代谢过程0.0426517274003166
去：0002429免疫应答激活细胞表面受体信号通路0.0426517274003166
去：0002768免疫反应调节细胞表面受体信号通路0.0426517274003166
去：0002757免疫应答激活信号转导0.0426517274003166
去：0009057大分子分解代谢过程0.0426517274003166
去：0002764免疫应答调节信号转导0.0426517274003166
GO:0030855号上皮细胞分化0.0449074914160441
转到：0019722钙介导的信号传导0.0449074914160441



此共同表达集群上的丰富示例本体术语<b>摘要：</b>为了总结1000个样本中的启动子活性（TSS区域的表达谱），我们基于FANTOM5样本本体（FF本体）进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题，我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式（TPM）。为了总结在这个共表达集群中丰富的本体，我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师：Hideya Kawaji链接到源数据集疾病数据<br>

疾病
本体术语p值n个
髓系白血病2008年7月41日31


此共表达簇上过度表达的TFBS（DNA）基序<b>摘要：</b>显示的值是该共表达簇中基序过度表达的p值。因此，较小的p值意味着强烈的过度代表性<b> 分析师：Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据

新颖的图案



JASPAR图案

Motifs公司-log10（p值）
MA0003.1号机组0.00035258
MA0004.1号机组0.0950574
MA0006.1号机组0.0636978
MA0007.1号机组0.21013
MA0009.1号机组0.226788
MA0014.1号0.00436367
MA0017.1号0.36614
MA0019.1号0.48606
MA0024.1号机组0.161864
MA0025.1号文件0.858925
MA0027.1号机组1.69083
MA0028.1号机组0.0757086
MA0029.1号机组0.173144
MA0030.1型0.166414
MA0031.1号文件0.13071
电话0038.10.0473031
MA0040.1型0.176624
MA0041.1号0.491879
MA0042.1号0.0861492
MA0043.1号0.643845
MA0046.1号1.17481
MA0048.1号0.0981386
马0050.10.086722
MA0051.1号0.17489
MA0052.1号1.01455
MA0055.1号0.772405
马0056.10
MA0057.1号0.0861015
MA0058.1号0.248826
MA0059.1号0.24649
马0060.10.071183
MA0061.1号0.00128149
MA0063.1号0
MA0066.1号0.179263
MA0067.1号0.466752
MA0068.1号0.000400878
马0069.10.620599
MA0070.1号0.209894
MA0071.1号0.0362647
MA0072.1号0.207017
MA0073.1号0.000937115
MA0074.1号0.393105
MA0076.1号0.27844
MA0077.1号0.584975
MA0078.1号0.0816416
MA0081.1号0.430446
MA0083.1号0.231773
MA0084.1号0.628386
MA0087.1号0.592935
MA0088.1号0.0166025
马0089.10
MA0090.1号0.0563452
MA0091.1号机组1.07875
MA0092.1号0.368747
MA0093.1号0.0658755
马0095.10
马0098.10
MA0100.1型0.0516781
MA0101.1号机组0.0218059
MA0103.1号0.250578
MA0105.1号0.000768518
MA0106.1号0.219819
MA0107.1号0.0263037
MA0108.2号1.30889
MA0109.1号0
MA0111.1号0.168097
MA0113.1号0.237178
MA0114.1号0.373995
MA0115.1号0.404335
MA0116.1号0.145567
MA0117.1号0.252146
马0119.10.386627
MA0122.1号机组0.743919
MA0124.1号机组0.371502
MA0125.1号机组0.829108
MA0130.1号机组0
马0131.10.0893561
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.247187
MA0136.1号机组0.729974
MA0139.1号0.331953
MA0140.1号机组0.599233
MA0141.1号0.243356
MA0142.1号0.114579
MA0143.1号0.51078
MA0144.1号机组0.0516892
MA0145.1号0.0252698
MA0146.1号0.0287776
MA0147.1号0.15144
MA0148.1号0.112894
MA0149.1号0.0331094
MA0062.2号0.0831258
MA0035.2号0.329382
MA0039.2号0.000480551
MA0138.2号机组0.0821519
MA0002.2号机组0.634583
马0137.20.0808931
MA0104.2号0.354713
MA0047.2号0.056737
MA0112.2号0.220422
MA0065.2号0.612136
MA0150.1号机组0.145397
MA0151.1号0
MA0152.1号0.616446
MA0153.1号机组0.29535
MA0154.1号机组1.08015
MA0155.1号0.463488
MA0156.1号机组0.526995
MA0157.1号0.332779
MA0158.1号0
MA0159.1号机组0.0295222
MA0160.1号0.124604
MA0161.1号机组0
MA0162.1号机组1.15568电子05
MA0163.1号机组0.00299633
MA0164.1号机组0.912151
MA0080.2号1.97139
马0018.20.22126
MA0099.2号机组0.147733
MA0079.2号3.79317e-07号
MA0102.2号机组0.661673
马0258.10.444615
马0259.10.0827141
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要：</b>对于每个TF和每个共表达簇，使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后，保留了ChIP显著富集（q<=0.05）的聚类<br><b>分析师：Erik Arner链接到源数据集数据

没有此群集的分析结果

共表达簇的相对表达<b>总结：</b>将共表达簇与FANTOM5样本进行比较，以获得相对表达<br><b>分析师：不适用<br><br>链接到数据源数据

检索自“http://f5-webapp4.gsc.riken.jp/resource_browser/index.php？title=共表达集群：C242&oldid=3067360"