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共表达簇以下为:第225页

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全名:C225_ductive_alvear_giant_前列腺_salivary_squamos_Rachel



第一阶段CAGE峰值

Hg19::chr10:16932413..16932437-电话:chr10:16932413..16932437
-
Hg19::chr10:17070392..17070407-电话:chr10:17070392..17070407
-
Hg19::chr10:4806777..4806787-电话:chr10:4806777..4806787
-
Hg19::chr10:4808676..4808703-电话:chr10:4808676..4808703
-
Hg19::chr10:4808737..4808750-电话:chr10:4808737..4808750
-
Hg19::chr11:13895146..13895156+电话:chr11:13895146..13895156
+
Hg19::chr12:76220619..76220626-电话:chr12:76220619..76220626
-
Hg19::chr13:63967430..63967434+电话:chr13:63967430..63967434
+
Hg19::chr15:35795980..3579585-电话:chr15:35795980..35795985
-
Hg19::chr15:35796430..35796456-电话:chr15:35796430..35796456
-
Hg19::chr17:66818826..66818835+电话:chr17:66818826..66818835
+
Hg19::chr18:2409216..2409225-电话:chr18:2409216..2409225
-
Hg19::chr1:162724324.162724330+电话:chr1:162724324..162724330
+
Hg19::chr1:162825560..162825574-p1@C1或f110
Hg19::chr1:16306336..163063330+电话:chr1:163063326..163063330
+
Hg19::chr1:78001338..78001348+电话:chr1:78001338..78001348
+
Hg19::chr1:94240786..94240801-第3页@uc001dqd.1
Hg19::chr1:94240846..94240855-p5@uc001dqd.1
Hg19::chr1:94240877..94240925-p2@uc001dqd.1页
Hg19::chr1:98779728..98779733-电话:chr1:98779728..98779733
-
Hg19::chr1:98850479..98850511-电话:chr1:98850479..98850511
-
Hg19::chr2:114004369..114004400-p@chr2:114004369.114004400
-
Hg19::chr2:114004420..114004422-电话:chr2:114004420..114004422
-
Hg19::chr2:139757287..139757309+电话:chr2:139757287..139757309
+
Hg19::chr2:139791188..139791193+p@chr2:139791188..139791193
+
Hg19::chr2:139791209..139791219+电话:chr2:139791209…139791219
+
Hg19::chr2:139791292..139791303+电话:chr2:139791292..139791303
+
Hg19::chr2:196278203..196278206+电话:chr2:196278203..196278206
+
Hg19::chr2:196278365..196278367+电话:chr2:196278365…196278367
+
Hg19::chr2:230450858..230550884-电话:chr2:230450858..230550884
-
Hg19::chr2:230450887..230550899-电话:chr2:230450887..230550899
-
Hg19::chr2:230680106..230680124-电话:chr2:230680106..230680124
-
Hg19::chr2:238378261..238378264-电话:chr2:238378261..238378264
-
Hg19::chr3:149051194..149051242-p5@TM4SF18
Hg19::chr3:153599269..153599304+p1@ENST00000463297
Hg19::chr3:188993877..188993894+电话:chr3:188993877..188993894
+
Hg19::chr3:189028187..189028196+电话:chr3:189028187..189028196
+
Hg19::chr3:189030852.1890 30859+p@基督3:189030852..1890 30859
+
Hg19::chr3:189121193..189121200+p@chr3:189121193..189121200
+
Hg19::chr3:189128229..189128239+电话:chr3:189128229..189128239
+
Hg19::chr3:189151408..189151415+电话:chr3:189151408..189151415
+
Hg19::chr3:83659759..83659783-电话:chr3:83659759..83659783
-
Hg19::chr3:84017708..84017724+电话:chr3:84017708..84017724
+
Hg19::chr4:125901946..125901955+电话:chr4:125901946..125901955
+
Hg19::chr4:81139190..81139200-电话:chr4:81139190..81139200
-
Hg19::chr4:81224883..81224888+电话:chr4:81224883..81224888
+
Hg19::chr5:141766141..141766182+电话:chr5:141766141..141766182
+
Hg19::chr5:27707663..27707672+电话:chr5:27707663..27707672
+
Hg19::chr5:27707697..27707707+电话:chr5:27707697..27707707
+
Hg19::chr5:56589068..56589074-电话:chr5:56589068..56589074
-
Hg19::chr5:56598008.56598013-电话:chr5:56598008..56598013
-
Hg19::chr5:57529651..57529657+电话:chr5:57529651..57529657
+
Hg19::chr5:57529696..57529706+电话:chr5:57529696..57529706
+
Hg19::chr5:57529719..57529726+电话:chr5:57529719..57529726
+
Hg19::chr5:92489155..92489169-电话:chr5:92489155..92489169
-
Hg19::chr6:145247788..145247818-电话:chr6:145247788..145247818
-
Hg19::chr6:165990105..165990115-p10@PDE10A
Hg19::chr6:165990158..165990169-第12页@PDE10A
Hg19::chr6:169691363..169691375-电话:chr6:169691363..169691375
-
Hg19::chr8:41052616..41052617-p@基督8:41052616..41052617
-
Hg19::chr8:41053290..41053297-电话:chr8:41053290..41053297
-
Hg19::chrX:13321104..13321106-电话:13321104..13321106
-
Hg19::chrX:18889509..18889513+p@chrX:1889509…18889513
+


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


GO标识GO名称FDR校正的p值
转到:0019002GMP绑定0.00809371024079062
GO:0030553号cGMP绑定0.00809371024079062
去:0030551环核苷酸结合0.0122606700313062
GO:0004114号3',5'-环核苷酸磷酸二酯酶活性0.0138255559698253
去:0004112环核苷酸磷酸二酯酶活性0.0138255559698253
去:0008081磷酸二酯水解酶活性0.0337831481914176



此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集单元格_数据<br>uberon_data(超级数据)<br>疾病数据<br>


单元格类型
本体术语p值n个
胰腺上皮细胞3.10e-50页4
优步解剖
本体术语p值n个
胰腺3.81e-21页10
内脏1.85e-1218
疾病
本体术语p值n个
胰腺癌1.55e-98型2
胰腺癌1.55e-98型2
胰腺导管腺癌1.55e-98型2
胰腺癌3.10电子-504
内分泌腺癌4.27e-34页6


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组1.68077e-11号
MA0004.1号机组0.59382
MA0006.1号机组0.0409568
MA0007.1号机组0.158809
MA0009.1号机组0.196219
MA0014.1号1.87231e-10号机组
MA0017.1号0.0647838
MA0019.1号0.404253
MA0024.1号机组0.136013
MA0025.1号文件0.778709
MA0027.1号机组1.64023
MA0028.1号机组0.0150707
MA0029.1号机组0.146371
MA0030.1型0.433144
MA0031.1号文件0.349229
电话0038.10.934456
MA0040.1型0.149577
MA0041.1号2.22512
MA0042.1号3.51029
MA0043.1号0.57133
MA0046.1号0.189523
MA0048.1号0.0869886
马0050.10.0625073
MA0051.1号0.136921
MA0052.1号0.462101
MA0055.1号0.000300352
马0056.10
MA0057.1号0.000422302
MA0058.1号0.332561
MA0059.1号0.18173
马0060.10.36689
MA0061.1号0.00911456
MA0063.1号0
MA0066.1号0.935977
MA0067.1号0.426099
MA0068.1号0.143048
马0069.10.187175
MA0070.1号0.53276
MA0071.1号0.799731
MA0072.1号0.177746
MA0073.1号0.0292881
MA0074.1号0.13631
MA0076.1号0.0330734
MA0077.1号0.99124
MA0078.1号0.0642227
MA0081.1号0.527155
MA0083.1号1.7309
MA0084.1号0.58417
MA0087.1号0.522703
MA0088.1号0.000977565
马0089.10
MA0090.1号0.232719
MA0091.1号机组0.361572
MA0092.1号0.490471
MA0093.1号1.00394
马0095.10
马0098.10
MA0100.1型0.350513
MA0101.1号机组0.106488
MA0103.1号0.473878
MA0105.1号0.00671316
MA0106.1号0.176444
MA0107.1号0.169146
MA0108.2号0.345418
MA0109.1号0
MA0111.1号0.0439819
MA0113.1号2.13809
MA0114.1号0.0135422
MA0115.1号0.365583
MA0116.1号0.0436546
MA0117.1号1.17644
马0119.12.02749
MA0122.1号机组0.237097
MA0124.1号机组0.887885
MA0125.1号机组0.272745
MA0130.1号机组0
马0131.10.0709376
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.215386
MA0136.1号机组0.33922
MA0139.1号0.000350674
MA0140.1号机组0.26368
MA0141.1号0.0267885
MA0142.1号1.0705
MA0143.1号1.14732
MA0144.1号机组0.349813
MA0145.1号0.00446344
MA0146.1号1.955e-09年
MA0147.1号0.300661
MA0148.1号0.212812
MA0149.1号0.0236308
MA0062.2号0.0902974
MA0035.2号0.788348
MA0039.2号5.77902e-09
MA0138.2号机组0.0646653
MA0002.2号机组0.127342
马0137.20.239026
MA0104.2号0.149763
MA0047.2号0.165401
MA0112.2号2.73187电子05
MA0065.2号0.0391677
MA0150.1号机组0.104809
MA0151.1号0
MA0152.1号0.273429
MA0153.1号机组0.722842
MA0154.1号机组0.00234838
MA0155.1号0.0389398
MA0156.1号机组0.607111
MA0157.1号0.278642
MA0158.1号0
MA0159.1号机组0.00429051
MA0160.1号0.233502
MA0161.1号机组0
MA0162.1号机组1.26675e-06
MA0163.1号机组3.88148e-05号
MA0164.1号机组0.204043
MA0080.2号0.339781
马0018.20.177725
MA0099.2号机组1.60754
MA0079.2号0
MA0102.2号机组0.616902
马0258.10.0594663
马0259.10.110843
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


没有此群集的分析结果

共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据