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共表达簇以下为：1965年

来自FANTOM5_SSTAR

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完整id:C165_上皮样d_脂肪细胞_间皮瘤_粘液纤维肉瘤_lung_胃_间皮



第一阶段CAGE峰值

Hg19:：chr10:125605888..125605891-电话：chr10:125605888..125605891
-
Hg19:：chr10:125605892..125605911-电话：chr10:125605892..125605911
-
Hg19:：克时10:135129617.135129626+电话：chr10:135129617..135129626
+
Hg19:：chr11:106426627..106426632+电话：chr11:106426627..106426632
+
Hg19:：chr11:132618576..132618601+电话：chr11:132618576..132618601
+
Hg19:：chr11:132618641..132618653+电话：chr11:132618641..132618653
+
Hg19:：chr11:134820867..134820899+p1@ENST00000528497
Hg19:：chr11:89114727..89114730+电话：chr11:89114727..89114730
+
Hg19:：chr12:54652060..54652084-16页@CBX5
Hg19:：chr13:24528588..24528596+电话：chr13:24528588..24528596
+
Hg19:：chr13:27202938..27202944-电话：chr13:27202938..27202944
-
Hg19:：chr14:100674067..100674074-电话：chr14:100674067..100674074
-
Hg19:：chr14:64761083..64761101-第1页@ESR2
Hg19:：chr14:64761275..64761283-第14页@ESR2
Hg19:：chr15:95590268..95590274-电话：chr15:95590268…95590274
-
Hg19:：chr16:11720946..11720960-电话：chr16:11720946…11720960
-
Hg19:：chr16:11720965..11720989-p@chr16:11720965..11720989
-
Hg19:：chr16:11720992..11721005-电话：chr16:11720992..11721005
-
Hg19:：chr16:85360152..85360165+电话：chr16:85360152..85360165
+
Hg19:：chr17:40477088..40477101-第24页@STAT3
Hg19:：chr17:46719983..46720028+电话：chr17:46719983..46720028
+
Hg19:：chr17:46720055..4672064+电话：chr17:46720055..4672064
+
Hg19:：chr17:467883984..46784023+电话：chr17:46783984..46784023
+
Hg19:：chr17:7167279..7167298-电话：chr17:7167279..7167298
-
Hg19:：chr17:8774055..8774068-电话：chr17:8774055.8774068
-
Hg19:：chr17:8774126..8774143-电话：chr17:8774126..8774143
-
Hg19:：chr18:18711938..18711943-电话：chr18:18711938…18711943
-
Hg19:：chr18:43282521..43282533-p@chr18:43282521..43282533
-
Hg19:：chr18:56495029..56495073+电话：chr18:56495029..56495073
+
Hg19:：chr18:61501808.61501812+电话：chr18:61501808..61501812
+
Hg19:：chr19:31630560..31630583-电话：chr19:31630560..31630583
-
Hg19:：chr19:54545613..54545621-电话：chr19:54545613..54545621
-
Hg19:：chr19:54545670..54545677-电话：chr19:54545670..54545677
-
Hg19:：chr19:54545692..54545704-电话：chr19:54545692..54545704
-
Hg19:：chr19:54545761..54545772-电话：chr19:54545761..54545772
-
Hg19:：chr19:54545780..54545792-电话：chr19:54545780..54545792
-
Hg19:：chr19:54545810..54545821-电话：chr19:54545810..54545821
-
Hg19:：chr19:54545833.54545844-电话：chr19:54545833..54545844
-
Hg19:：chr19:545981154..54598171+电话：chr19:545981154..54598171
+
Hg19:：chr19:546000897..54600899+电话：chr19:546008997..54600899
+
Hg19:：chr19:6600819..6600831-电话：chr19:6600819..6600831
-
Hg19:：chr1:233860206..233860221+p1@BC032032
Hg19:：chr1:233860255..233860261+第2页@BC032032
Hg19:：chr1:240319887..240319892+电话：chr1:240319887..240319892
+
Hg19:：chr1:240320047..240320058+电话：chr1:240320047..240320058
+
Hg19:：chr21:32460330..32460336-电话：chr21:32460330..32460336
-
Hg19:：chr21:32526965..32526979-电话：chr21:32526965..32526979
-
Hg19:：chr21:32529607..32529639-电话：chr21:32529607..32529639
-
Hg19:：chr21:45175275..45175288+电话：chr21:45175275..45175288
+
Hg19:：chr2:107201761..107201766+电话：chr2:107201761..107201766
+
Hg19:：chr2:172271476..172271479+电话：chr2:172271476..172271479
+
Hg19:：chr2:173955327..173955334+p26@扎克
Hg19:：chr2:173955472..173955479+p17@扎克
Hg19:：chr2:173955485..173955502+p19@扎克
Hg19:：chr2:173955505..173955510+第30页@ZAK
Hg19:：chr2:178887106..178887129+电话：chr2:178887106..178887129
+
Hg19:：chr2:220548381..220548386+电话：chr2:220548381..220548386
+
Hg19:：chr2:75145535..75145551+第4页@ENST00000435984
Hg19:：chr3:153575775..153575789+电话：chr3:153575775..153575789
+
Hg19:：chr3:153587786..153587791+电话：chr3:153587786..153587791
+
Hg19:：chr3:36170472..36170478-电话：chr3:36170472..36170478
-
Hg19:：chr3:36170751..36170761-电话：chr3:36170751..36170761
-
Hg19:：chr3:36170775..36170785-p@chr3:36170775..36170785
-
Hg19:：chr3:40101288..40101291-电话：chr3:40101288..40101291
-
Hg19:：chr3:40118776..40118784-电话：chr3:40118776..40118784
-
Hg19:：chr3:79552183..79552188+p@chr3:79552183..79552188
+
Hg19:：chr4:112993808..112993821-p1@ENST00000511219
Hg19:：chr4:138978577..138978584+p1@ENST00000510066
Hg19:：chr4:183750430..183750442+电话：chr4:183750430..183750442
+
Hg19:：chr4:183750467..183750481+电话：chr4:183750467..183750481
+
Hg19:：chr4:77378488..77378494+电话：chr4:77378488..77378494
+
Hg19:：chr5:142023708..142023717-第12页@FGF1
Hg19:：chr5:142023729..142023736-第26页@FGF1
Hg19:：chr5:142023741..142023750-第18页@FGF1
Hg19:：chr5:142023781..142023810-第7页@FGF1
Hg19:：chr5:177989725..177989735-第3页@COL23A1
Hg19:：chr6:142429681..142429688-电话：chr6:142429681..142429688
-
Hg19:：chr7:137459538..137459553-第5页@DGKI
Hg19:：第7章第37495557节。第137459587节-第3页@DGKI
Hg19:：chr7:157478953..157478987-电话：chr7:157478953..157478987
-
Hg19:：chr7:32245227..32245235+电话：chr7:32245227…32245235
+
Hg19:：chr7:68859601..68859605+电话：chr7:68859601..68859605
+
Hg19:：chr7:80929708..80929725+电话：chr7:80929708..80929725
+
Hg19:：chr8:100957024..100957046+电话：chr8:100957024..100957046
+
Hg19:：chr8:41559667..41559679-电话：chr8:41559667..41559679
-
Hg19:：chr8:67372487..67372498+p14@C8或46
Hg19:：chr8:67372512..67372525+p13@C8或46
Hg19:：chr8:67372527..67372543+p11@C8或46
Hg19:：chr8:69770351..69770355-电话：chr8:69770351..69770355
-
Hg19:：chr8:69961533..69961540+电话：chr8:69961533..69961540
+
Hg19:：chr8:69961543..69961549+电话：chr8:69961543..69961549
+
Hg19:：chr8:69961573..69961578+电话：chr8:69961573..69961578
+
Hg19:：chr8:91072321..91072339-警察：91072321.91072339
-
Hg19:：chr8:91110423..91110427-电话：chr8:91110423..91110427
-
Hg19:：chr9:118595109..118595124+电话：chr9:118595109..118595124
+
Hg19:：chr9:129142549..129142572+电话：chr9:129142549..129142572
+
Hg19:：chr9:26171424..26171462-电话：chr9:26171424..26171462
-
Hg19:：chr9:72658490..72658502+第7页@MAMDC2
Hg19:：chr9:72658586..72658589+第9页@MAMDC2
Hg19:：chr9:72658756..72658770+p1@MAMDC2
Hg19:：chr9:72658776..72658789+第2页@MAMDC2
Hg19:：chr9:72833439..72833449+电话：chr9:72833439..72833449
+
Hg19:：chr9:72841128..72841129+电话：chr9:72841128..72841129
+
Hg19:：chr9:72841375..72841399+p@chr9:72841375..72841399
+
Hg19:：chrX:135338503..135338520-p10@地图7D3


此共表达簇上的丰富路径<b>摘要：典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路，转录调控基因（下游靶点）是从Netpath获得的。综合起来，典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后，采用Benjamini-Hochberg方法对所得P值进行调整，以进行多重比较<br><b>分析师：Emmanuel Dimont链接到源数据集数据

此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要：共表达簇的GOStat分析结果。使用GOStat（PMID:14962934）和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师：Erik Arner链接到源数据集数据

GO标识GO名称FDR校正的p值
去：0005057受体信号蛋白活性0.00187153831806653
去：0032147蛋白激酶活性的激活0.0142407650132369
GO:0030284号雌激素受体活性0.020902304528568
GO:0045860号蛋白激酶活性的正调控0.020902304528568
GO:0033674号激酶活性的正调控0.020902304528568
去：0051347转移酶活性的正调控0.020902304528568
去：0007242细胞内信号级联0.0216310065997641
GO:0010369号色心0.0216310065997641
去：0005062造血素/干扰素类（D200域）细胞因子受体信号转导活性0.025634107310511
GO:0045859号蛋白激酶活性的调节0.0289687346932396
GO:0043549号激酶活性的调节0.0289687346932396
去：0051338转移酶活性的调节0.0289687346932396
GO:0043085号催化活性的正向调节0.0289687346932396
GO:0048523号细胞过程的负调控0.030519020041891
GO:0048519号生物过程的负调控0.030519020041891
去：0030547受体抑制剂活性0.030519020041891
去：0048019受体拮抗剂活性0.030519020041891
去：0030545受体调节器活性0.031699338724088
去：0030520雌激素受体信号通路0.031699338724088
GO:0000186号激活MAPKK活性0.031699338724088
转到：0005720核异染色质0.0329309851972766
去：0007165信号转导0.0330777726270606
去：0007243蛋白激酶级联0.0348684891743291
转到：0004709MAP激酶激酶活性0.0404629308483515
去：0007154小区通信0.0404629308483515
去：0008134转录因子结合0.0404629308483515
去：0000792异染色质0.0415797028128656
去：0032502发展过程0.0415797028128656
去：0007257激活JNK活性0.041692835575608
去：0000790核染色质0.0423177233929349
GO:0043507编号JNK活性的正调控0.0423177233929349
去：0005515蛋白质结合0.0423177233929349
GO:0043506号JNK活性的调节0.0423177233929349
去：0000077DNA损伤检查点0.0423177233929349
去：0005634核0.0436945181120922
电话：0031570DNA完整性检查点0.0447489183466585
去：0004143二酰甘油激酶活性0.0469213957622966
GO:0000776号动粒0.0469213957622966
去：0006953急性期反应0.0471882062699121



此共同表达集群上的丰富示例本体术语<b>摘要：</b>为了总结1000个样本中的启动子活性（TSS区域的表达谱），我们基于FANTOM5样本本体（FF本体）进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题，我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式（TPM）。为了总结在这个共表达集群中丰富的本体，我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师：Hideya Kawaji链接到源数据集疾病数据<br>

疾病
本体术语p值n个
上皮样肉瘤195年4月42日1
间充质细胞肿瘤1.55e-98型2


此共表达簇上过度表达的TFBS（DNA）基序<b>摘要：</b>显示的值是该共表达簇中基序过度表达的p值。因此，较小的p值意味着强烈的过度代表性<b> 分析师：Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据

新颖的图案



JASPAR图案

Motifs公司-log10（p值）
MA0003.1号机组0
MA0004.1号机组0.176213
MA0006.1号机组0.00853074
MA0007.1号机组0.260424
MA0009.1号机组0.298819
MA0014.1号2.49358电子-09
MA0017.1号0.0179123
MA0019.1号0.0504923
MA0024.1号机组0.0515938
MA0025.1号文件0.46388
MA0027.1号机组1.42172
MA0028.1号机组0.000720034
MA0029.1号机组0.799574
MA0030.1型0.0539943
MA0031.1号文件0.605377
电话0038.11.91577
MA0040.1型0.215556
MA0041.1号0.206427
MA0042.1号0.00845154
MA0043.1号0.299173
MA0046.1号0.084519
MA0048.1号0.00941042
马0050.10.157318
MA0051.1号0.83837
MA0052.1号0.060786
MA0055.1号0.000557334
马0056.10
MA0057.1号2015年9月5日
MA0058.1号0.20877
MA0059.1号0.119783
马0060.139.5432
MA0061.1号0.893914
MA0063.1号0
MA0066.1号0.0986893
MA0067.1号0.265212
MA0068.1号0.929947
马0069.10.082986
MA0070.1号1.98582
MA0071.1号0.471948
MA0072.1号0.265509
MA0073.1号3.27871e-15号机组
MA0074.1号0.203604
MA0076.1号0.0118563
MA0077.1号0.0740083
MA0078.1号0.0161997
MA0081.1号0.322988
MA0083.1号0.307305
MA0084.1号0.403089
MA0087.1号0.262908
MA0088.1号0.272399
马0089.10
MA0090.1号0.169578
MA0091.1号机组1.54199
MA0092.1号2.28578
MA0093.1号0.167315
马0095.10
马0098.10
MA0100.1型0.0382953
MA0101.1号机组4.21603
MA0103.1号0.0824658
MA0105.1号0.155476
MA0106.1号0.276641
MA0107.1号3.48354
MA0108.2号0.597985
MA0109.1号0
MA0111.1号0.193933
MA0113.1号0.0559966
MA0114.1号0.000321184
MA0115.1号0.215224
MA0116.1号0.0309439
MA0117.1号0.342325
马0119.10.0204458
MA0122.1号机组0.752024
MA0124.1号机组0.189889
MA0125.1号机组0.142939
MA0130.1号机组0
马0131.10.0189408
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.682662
MA0136.1号机组0.221498
MA0139.1号0.00496791
MA0140.1号机组2.00205
MA0141.1号0.117335
MA0142.1号0.530469
MA0143.1号0.151498
MA0144.1号机组0.00797278
MA0145.1号0.00244934
MA0146.1号2007年9月9日至14日
MA0147.1号0.00608857
MA0148.1号0.786455
MA0149.1号0.0195608
MA0062.2号1.24328e-05
MA0035.2号1.26347
MA0039.2号1999年9月9日-07日
MA0138.2号机组0.377855
MA0002.2号机组0.00550477
马0137.20.000841325
MA0104.2号0.00102503
MA0047.2号0.256341
MA0112.2号0.000139596
MA0065.2号0.000677449
MA0150.1号机组1.02295
MA0151.1号0
MA0152.1号0.483435
MA0153.1号机组0.134266
MA0154.1号机组0.00630179
MA0155.1号0.0190879
MA0156.1号机组0.132403
MA0157.1号0.757372
MA0158.1号0
MA0159.1号机组0.0640183
MA0160.1号0.244856
MA0161.1号机组0
MA0162.1号机组2014年9月9日-07日
MA0163.1号机组4.77667e-08号
MA0164.1号机组5.98855
MA0080.2号0.897349
马0018.20.136257
MA0099.2号机组2.48588
MA0079.2号0
MA0102.2号机组0.432633
马0258.10.0554076
马0259.10.0186401
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要：</b>对于每个TF和每个共表达簇，使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后，保留了ChIP显著富集（q<=0.05）的聚类<br><b>分析师：Erik Arner链接到源数据集数据

（#promoters=该共表达簇中具有TF的ChIP信号的启动子数量）

TF公司#发起人丰富p值q值
NFYA#4800172.983189256163045.08516815361666e-050.000866378265571893
NFYB#4801152.394256179076640.001442698631975080.00925175011819016



共表达簇的相对表达<b>总结：</b>将共表达簇与FANTOM5样本进行比较，以获得相对表达<br><b>分析师：不适用<br><br>链接到数据源数据

检索自“http://f5-webapp4.gsc.riken.jp/resource_browser/index.php？title=Coexpression_cluster:C165&oldid=3067283"