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共表达簇以下为:149元

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完整标识:C149_ocpital_medial_brain_amygdala_parietal_crebral_be小脑



第一阶段CAGE峰值

Hg19::chr11:109295305..109295312+p13@C11或87
Hg19::chr11:117708272..117708286-电话:chr11:117708272..117708286
-
Hg19::chr11:117711055..117711088-电话:chr11:117711055..117711088
-
Hg19::chr11:124616783..124616814+电话:chr11:124616783..124616814
+
Hg19::chr11:124616829..124616838+电话:chr11:124616829..124616838
+
Hg19::chr11:124616862..124616874+电话:chr11:124616862..124616874
+
Hg19::chr11:124616993..124617007+电话:chr11:124616993..124617007
+
Hg19::chr11:1579486..1579500-电话:chr11:1579486..1579500
-
Hg19::chr11:35276496..35276513-p@chr11:35276496..35276513
-
Hg19::chr11:62475766..62475783+第2页@GNG3
Hg19::chr11:62476322..62476329+电话:chr11:62476322..62476329
+
Hg19::chr11:62476418..62476427+p@基督11:62476418..62476427
+
Hg19::chr11:788371..788384-第7页@CEND1
Hg19::chr11:788579..788588-第10页@CEND1
Hg19::chr12:50264369.50264380-第13页@传真2
Hg19::chr12:50284493..50284508-电话:chr12:50284493..50284508
-
Hg19::chr12:50291815..50291826-p@chr12:50291815..50291826
-
Hg19::chr12:57957251..57957258+电话:chr12:57957251..57957258
+
Hg19::chr12:57974899..57974914+12页@KIF5A
Hg19::chr12:6804679..6804701-电话:chr12:6804679..6804701
-
Hg19::chr12:99145213..99145224-第21页@ANKS1B
Hg19::chr14:103986341..103986353-电话:chr14:103986341..103986353
-
Hg19::chr14:60063355..60063387-电话:chr14:60063355..60063387
-
Hg19::chr14:60063439..60063448-p@chr14:60063439..60063448
-
Hg19::chr14:60063478.60063487-电话:chr14:60063478..60063487
-
Hg19::chr14:90873274..90873290+p43@校准1
Hg19::chr15:43813238..43813252+p17@地图1A
Hg19::chr15:43823079..43823119+电话:chr15:43823079..43823119
+
Hg19::chr15:90809459..90809470+第16页@NGRN
Hg19::chr16:19871596..19871607-电话:chr16:19871596..19871607
-
Hg19::chr16:56388775..56388786+电话:chr16:56388775..56388786
+
Hg19::chr16:743174..743190-电话:chr16:743174..743190
-
Hg19::chr16:743985..744004-电话:chr16:743985..744004
-
Hg19::chr16:747239..747260-p13@FBXL16
Hg19::chr16:7568245..7568260+电话:chr16:7568245..7568260
+
Hg19::chr17:26369560..26369599+p5@荷兰
Hg19::chr17:7560287..7560299+第13页@ATP1B2
Hg19::chr17:77111716.77111739-p1@AB528944
Hg19::chr18:3814105..3814117-电话:chr18:3814105..3814117
-
Hg19::chr19:18308079..18308090-电话:chr19:18308079..18308090
-
Hg19::chr19:18731255..18731287+p@chr19:18731255..18731287
+
Hg19::chr19:36523273..36523285-第13页@CLIP3
Hg19::chr19:42474687..42474704-第7页@ATP1A3
Hg19::chr19:424857760..42485786-电话:chr19:424857760..42485786
-
Hg19::chr19:47112153..47112167+p3@AK124456
Hg19::chr19:4993316..49933172-电话:chr19:49933161..49933172
-
Hg19::chr19:55684730..55684730-电话:chr19:55684730..55684739
-
Hg19::chr19:6494544..6494555-电话:chr19:6494544..6494555
-
Hg19::chr1:155851785..155851821+电话:chr1:155851785..155851821
+
Hg19::chr1:20810135..20810150-p12@凸轮轴颈2°N1
Hg19::chr1:240370881..240370888+电话:chr1:240370881..240370888
+
Hg19::chr1:26609014..26609025-电话:chr1:26609014..26609025
-
Hg19::chr1:41107481..41107490-p5@轮辋3
Hg19::chr1:50661281..50661326+电话:chr1:50661281..50661326
+
Hg19::chr1:77987565..77987576+p@基督1:77987565..77987576
+
Hg19::chr1:78024449..78024457+电话:chr1:78024449..78024457
+
Hg19::chr20:10256108..10256138+第5页@SNAP25
Hg19::chr20:10256139..10256151+第6页@SNAP25
Hg19::chr20:10258344..10258353+电话:chr20:10258344..10258353
+
Hg19::chr20:10277603..10277615+电话:chr20:10277603..10277615
+
Hg19::chr20:23356084..23356097-电话:chr20:23356084..23356097
-
Hg19::chr20:34820071..34820089+p@chr20:34820071..334820089
+
Hg19::chr20:36572681..36572688+电话:chr20:36572681..36572688
+
Hg19::chr20:44038648..44038659+电话:chr20:44038648..44038659
+
Hg19::chr21:27394184..27394203-第35页@APP
Hg19::chr2:149679712..149679726+电话:chr2:149679712..149679726
+
Hg19::chr2:149679731..149679740+电话:chr2:149679731..149679740
+
Hg19::chr2:166246839.166246855+p6@SCN2A
Hg19::chr2:17836942..17836979+电话:chr2:17836942..17836979
+
Hg19::chr2:210557572..210557587+电话:chr2:210557572..210557587
+
Hg19::chr2:241724426..241724440-电话:chr2:241724426..241724440
-
Hg19::chr2:26205144..26205178-第8页@KIF3C
Hg19::chr2:44546521..44546539-电话:chr2:44546521..44546539
-
Hg19::chr3:149684096..149684130-电话:chr3:149684096..149684130
-
Hg19::chr3:49662624.49662643+电话:chr3:49662624..49662643
+
Hg19::chr3:85008200..85008248+第2页@CADM2
Hg19::chr4:176556169..176556177-电话:chr4:176556169..176556177
-
Hg19::chr4:780193..780202-电话:chr4:780193..780202
-
Hg19::chr4:786348..786365-p7@CPLX1
Hg19::chr5:149601723..149601751-电话:chr5:149601723..149601751
-
Hg19::chr5:149601763..149601781-电话:chr5:149601763..149601781
-
Hg19::chr5:149602244..149602265-电话:chr5:149602244..149602265
-
Hg19::chr5:149644556..149644576-电话:chr5:149644556..149644576
-
Hg19::chr5:175305938..175305959+电话:chr5:175305938..175305959
+
Hg19::chr5:175307176..175307188+电话:chr5:175307176..175307188
+
Hg19::chr5:176047349..176047358-电话:chr5:176047349..176047358
-
Hg19::chr5:176047426..176047433-电话:chr5:176047426..176047433
-
Hg19::chr5:176047734..176047748-p@基督5:176047734..176047748
-
Hg19::chr6:17463258..17463269+电话:chr6:17463258..17463269
+
Hg19::chr6:31513145..31513194-电话:chr6:31513145..31513194
-
Hg19::chr6:31513206..31513220-电话:chr6:31513206..31513220
-
Hg19::chr6:31513929..31513944-电话:chr6:31513929..31513944
-
Hg19::chr6:46191004..46191017-p@chr6:46191004.46191017
-
Hg19::chr6:5999372..5999383-电话:chr6:5999372..5999383
-
Hg19::chr6:96463946..96463957+第4页@FUT9
Hg19::chr7:104844144..104844161-p7@SRPK2
Hg19::chr7:54617830..54617836+电话:chr7:54617830..54617836
+
Hg19::chr7:75959123..75959144-电话:chr7:75959123..75959144
-
Hg19::chr7:98445661..98445681-第11页@TMEM130
Hg19::chr7:98452904..98452938-p@chr7:98452904..98452938
-
Hg19::chr7:98457898.98457907-电话:chr7:98457898.98457907
-
Hg19::chr7:98457936..98457953-电话:chr7:98457936..98457953
-
Hg19::chr8:107531209..107531222+电话:chr8:107531209..107531222
+
Hg19::chr8:24810399..24810424-电话:chr8:24810399..24810424
-
Hg19::chr8:24811752..24811777-电话:chr8:24811752..24811777
-
Hg19::chr9:130454420..130454442+电话:chr9:130454420..130454442
+
Hg19::chr9:137982097..137982113+电话:chr9:137982097..137982113
+
Hg19::chr9:138011822..138011833+第17页@OLFM1
Hg19::chr9:35748867..35748868-第13页@GBA2
Hg19::chr9:93375167..93375214-第6页@DIRAS2
Hg19::chr9:99220754..99220765+第6页@HABP4
Hg19::chrX:38525424..38525435+第8页@TSPAN7
Hg19::chrX:338547270.38547317+电话:38547270..38547317
+
Hg19::chrX:48689784..48689807-电话:48689784.48689807
-


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


p.值财务总监n基因n通道姓名
0.000266441327965450.033731472120426223近端小管碳酸氢盐回收(KEGG):04964
0.0001119032950068330.017708696434831489唾液分泌(KEGG):04970
6.45586159951881e-050.013621867974984774胃酸分泌(KEGG):04971
4.34530766860615e-07号0.0002750579754227697466止血(反应组):REACT_604
5.23845554546341e-05号0.01362186797498474197突触传递(反应组):REACT_13685



此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


GO标识GO名称FDR校正的p值
去:0006836神经递质运输0.00897919041513745
去:0031402钠离子结合0.00897919041513745
去:0005391钠钾交换ATP酶活性0.00897919041513745
去:0006887胞吐0.00897919041513745
去:0005871驱动蛋白复合体0.0173895998883744
GO:0044459号质膜部分0.0184246069135385
去:0006814钠离子传输0.018569695369367
GO:0005875号微管相关复合体0.018569695369367
去:0005886质膜0.018569695369367
去:0031420碱金属离子结合0.0217426956653378
GO:0044425号膜部件0.0217426956653378
GO:0016142号O-糖苷分解代谢过程0.0217426956653378
去:0033130乙酰胆碱受体结合0.0217426956653378
GO:0016140号O-糖苷代谢过程0.0217426956653378
GO:0045045编号分泌途径0.0229413380745906
GO:0016020编号薄膜0.0231312271272513
GO:0016192号囊泡介导转运0.0266852479449219
去:0007268突触传递0.0266852479449219
GO:0051649号细胞定位的建立0.0266852479449219
GO:0016137号糖苷代谢过程0.0266852479449219
GO:0016139号糖苷分解代谢过程0.0266852479449219
去:0035235离子型谷氨酸受体信号通路0.0266852479449219
去:0032940细胞分泌0.0266852479449219
去:0005874微管0.0266852479449219
GO:0051641号细胞定位0.026699697161869
去:0005794高尔基体0.0294353054527756
GO:0019226号神经冲动的传递0.0294353054527756
去:0005737细胞质0.0294353054527756
去:0035253睫状根0.0294353054527756
GO:0016081号胞吐过程中突触小泡对接0.0294353054527756
去:0008422β-葡萄糖苷酶活性0.0294353054527756
去:0006810运输0.0351884991944362
去:0007243蛋白激酶级联0.0374902103733455
去:0046903分泌物0.0380766997085923
去:0051234建立本地化0.0380766997085923
GO:0044464号电池部件0.0403543762700639
去:0004348葡糖神经酰胺酶0.0410719101615185
去:0030054细胞结0.0467409041374484
GO:0046920号α(1,3)-岩藻糖基转移酶活性0.0467409041374484
去:0000287镁离子结合0.0476209460943883
GO:0044441号纤毛部0.0476209460943883
去:0008542视觉学习0.0476209460943883
转到:0003777微管运动活性0.0476209460943883
GO:0030955号钾离子结合0.0476209460943883
GO:0015662号ATP酶活性,与离子跨膜运动耦合,磷酸化机制0.0476209460943883
GO:0051179号本地化0.0476209460943883
GO:0016079号突触小泡胞吐0.0476209460943883
编号:0001504神经递质吸收0.0476209460943883
去:0050796胰岛素分泌的调节0.0476209460943883
去:0006878细胞铜离子稳态0.0476209460943883
去:0005890钠钾交换ATP酶复合物0.0476209460943883



此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集uberon_data(超级数据)<br><br>


优步解剖
本体术语p值n个
神经管4.56电子-1256
神经棒4.56e-112页56
未来脊髓4.56e-112页56
神经龙骨4.56e-112页56
神经系统区域部分2.46e-10653
大脑区域部分2.46e-106页53
端脑1996年8月20日34
脑灰质1.14e-9534
灰质1.14e-9534
大脑半球5.57e-95页32
大脑皮层区域部分2.09e-92年22
前脑区域部分8.95e-91页41
前脑8.95e-91页41
前神经管8.95e-91年41
未来前脑8.95e-91页41
2.73e-90页68
未来大脑2.73e-90页68
中枢神经系统5.12e-88页81
端脑区域部分7.14e-88页32
新皮质1.41e-83页20
大脑皮层3.94e-8125
大脑皮层3.94e-81页25
神经系统1.28电子-7889
神经板1.69e-74页82
假定神经板1.69e-74页82
神经外胚层1.04e-7086
弦前神经板2.81e-59页61
外髓氦3.14e-57页104
成体生物2.13e-49页114
神经嵴对发育有贡献的结构3.30e-46页132
外胚层衍生结构1.01e-37号文件171
外胚层1.01e-37号文件171
推测外胚层1.01e-37号文件171
器官系统细分1.89e-30223
脑回1.38e-276
1.80e-27192
颞叶1.35e-23页6
枕叶2.70电子-235
顶叶3.72e-23页5
边缘系统4.68e-23条5
后神经管1.05e-2115
弦神经板1.05e-2115
解剖导管2.21e-20页240
脑干2.02e-17年6
基底神经节2.48e-17页9
神经轴核复合体2.48e-17页9
大脑的聚集区域部分2.48e-17页9
基底神经节集合2.48e-17页9
大脑皮层下2.48e-17页9
神经核1.18e-169
大脑核1.18e-169
后脑节段性细分1.36e-16号机组12
后脑1.36e-16号机组12
推定后脑1.36e-16号机组12
器官部分2.22e-16日218
神经系统节段性细分2.99e-15日13
解剖簇5.91e-15页373
额叶皮层1.72e-14页
上皮2014年3月5日306
细胞层2014年5月3日309
脑桥2.30电子-13
多组织结构2012年5月8日342
后脑局部7.51e-12页9
后脑7.51e-12页9
未来后脑7.51e-12页9
颞中回1.60至102
扁桃形结构1.68e-102
额叶中回2.12e-10段2
纹状体2.16e-10页4
纹状体2.16e-10页4
端脑腹侧2.16e-10页4
未来纹状体2.16e-10页4
阿蒙角2.32e-102
大脑皮层的叶部2.32e-102
海马结构2.32e-102
边缘叶2.32e-102
端脑核4.36e-10段7
蓝斑2009年4月1日2
脑干核1.94e-09年2
后脑核1.94e-09年2
器官2008年4月30日503
胚层2007年7月7日560
胚层/神经嵴2007年7月7日560
胚胎组织2007年7月7日560
假定结构2007年7月7日560
胚层/神经嵴衍生结构2007年7月7日560
表皮母细胞(普通)2007年7月7日560
胚胎结构2007年11月6日564
脊髓7月60日-07日
背区元件7月60日-07日
背部7月60日-07日
尾壳核9月35日-07日
背侧纹状体9月35日-07日


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组0.000327514
MA0004.1号机组0.0249869
MA0006.1号机组0.0318687
MA0007.1号机组0.11131
MA0009.1号机组0.262535
MA0014.1号0.00770461
MA0017.1号0.29019
MA0019.1号0.638291
MA0024.1号机组0.0423208
MA0025.1号文件0.419231
MA0027.1号机组1.38672
MA0028.1号机组0.00691171
MA0029.1号机组0.0476412
MA0030.1型0.684347
MA0031.1号文件0.119734
电话0038.10.0246698
MA0040.1型0.185063
MA0041.1号0.160263
MA0042.1号0.342304
MA0043.1号0.0759646
MA0046.1号0.251177
MA0048.1号0.0221717
马0050.10.213935
MA0051.1号0.0729745
MA0052.1号0.188518
MA0055.1号0.266805
马0056.10
MA0057.1号1.75598
MA0058.1号0.0173673
MA0059.1号0.246164
马0060.10.000444443
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ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


没有此群集的分析结果

共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据