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共表达簇以下为：139元

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完整id:C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal



第一阶段CAGE峰值

Hg19:：克时10:105846063.105846083-第5页@COL17A1
Hg19:：chr11:107418886..107418917+电话：chr11:107418886..107418917
+
Hg19:：chr11:117152313..117152356+第4页@RNF214
Hg19:：chr11:117152405..117152414+第17页@RNF214
Hg19:：chr11:117152437..117152448+第12页@RNF214
Hg19:：chr11:117152450..117152451+第21页@RNF214
Hg19:：chr11:20057481..20057496+电话：chr11:20057481..20057496
+
Hg19:：chr11:5064816..5064825+电话：chr11:5064816..5064825
+
Hg19:：chr11:86334270..86334280+电话：chr11:86334270..86334280
+
Hg19:：chr11:9754117..9754125+p13@SWAP70
Hg19:：chr12:132475501..132475504+p@chr12:132475501..132475504
+
Hg19:：chr12:132475623..132475637+电话：chr12:132475623..132475637
+
Hg19:：chr12:41374693..41374709+电话：chr12:41374693..41374709
+
Hg19:：chr12:41374715..41374720+电话：chr12:41374715..41374720
+
Hg19:：chr12:41374726..41374748+p@chr12:41374726.41374748
+
Hg19:：chr12:41374749..41374779+电话：chr12:41374749..41374779
+
Hg19:：chr12:41374792..41374806+电话：chr12:41374792..41374806
+
Hg19:：chr12:41374821..41374828+电话：chr12:41374821..41374828
+
Hg19:：chr12:41374830..41374843+电话：chr12:41374830..41374843
+
Hg19:：chr13:45781332..45781345+电话：chr13:45781332..45781345
+
Hg19:：chr13:94958313..94958338+电话：chr13:94958313..94958338
+
Hg19:：chr14:36998889..36998925+电话：chr14:36998889…36998925
+
Hg19:：chr14:56711322..5671131+电话：chr14:56711322..5671131
+
Hg19:：chr15:36653779..36653789-电话：chr15:36653779..36653789
-
Hg19:：chr15:40069726..40069746-电话：chr15:40069726..40069746
-
Hg19:：chr15:49217959..49217969-p@chr15:49217959..49217969
-
Hg19:：chr15:49217985..49217990-电话：chr15:49217985..49217990
-
Hg19:：chr15:49255230..49255248-第16页@SHC4
Hg19:：chr15:49255569..49255578-第20页@SHC4
Hg19:：chr15:99434469..99434480+电话：chr15:99434469…99434480
+
Hg19:：chr15:99434544..99434559+电话：chr15:99434544…99434559
+
Hg19:：chr15:99434663..99434673+电话：chr15:99434663.99434673
+
Hg19:：chr16:85617034..85617043-电话：chr16:85617034..85617043
-
Hg19:：chr16:85617044..85617059-电话：chr16:85617044..85617059
-
Hg19:：chr16:85617064..85617073-电话：chr16:85617064..85617073
-
Hg19:：chr16:85617082..85617098-电话：chr16:85617082..85617098
-
Hg19:：chr16:85617170..85617191-电话：chr16:85617170..85617191
-
Hg19:：chr16:85617192..85617217-电话：chr16:85617192..85617217
-
Hg19:：chr17:15555123.15555141-第4页@TRIM16
Hg19:：chr17:6099834..6099873+电话：chr17:6099834..6099873
+
Hg19:：chr18:11391769..11391782-电话：chr18:11391769..11391782
-
Hg19:：chr18:55721963..55721974+p40@NEDD4L
Hg19:：chr18:55721981..55721992+p42@NEDD4L
Hg19:：chr18:63802163..63802169+电话：chr18:63802163..63802169
+
Hg19:：chr18:63802179..63802185+电话：chr18:63802179..63802185
+
Hg19:：chr18:63802190..63802197+电话：chr18:63802190..63802197
+
Hg19:：chr18:66485720..66485728+电话：chr18:66485720…66485728
+
Hg19:：chr18:66485736..66485758+电话：chr18:66485736..66485758
+
Hg19:：chr18:9100027..9100043+p@克莱斯勒18:9100027..9100043
+
Hg19:：chr18:9100055..9100067+电话：chr18:9100055..9100067
+
Hg19:：chr1:109400845..109400854-p5@AKNAD1
Hg19:：chr1:109400860..109400871-第3页@AKNAD1
Hg19:：chr1:152286943..152286949+p@chr1:152286943.152286949
+
Hg19:：chr1:152297708..152297722-第1页@FLG
Hg19:：chr1:186946611..186946622+电话：chr1:186946611..186946622
+
Hg19:：chr1:20608774..20608813+电话：chr1:20608774..20608813
+
Hg19:：chr1:20609126..20609137+电话：chr1:20609126..20609137
+
Hg19:：chr1:20609280..20609293+电话：chr1:20609280..20609293
+
Hg19:：chr1:225962665..225962674+电话：chr1:225962665..225962674
+
Hg19:：chr1:230921649..230921659+电话：chr1:230921649…230921659
+
Hg19:：chr1:236072503..236072522+电话：chr1:236072503..236072522
+
Hg19:：chr1:236072592.236072599+电话：chr1:236072592..236072599
+
Hg19:：chr1:41898930..41898936+电话：chr1:41898930..41898936
+
Hg19:：chr1:43310323..43310328-p@chr1:43310323.43310328
-
Hg19:：chr1:44872537..44872548+电话：chr1:44872537..44872548
+
Hg19:：chr1:98552894..98552910+电话：chr1:98552894.98552910
+
Hg19:：chr20:49983328..49983340+电话：chr20:49983328..49983340
+
Hg19:：chr20:49983349..49983354+电话：chr20:49983349..49983354
+
Hg19:：chr20:49983362..49983378+电话：chr20:498983362..49983378
+
Hg19:：chr20:49983397..49983415+电话：chr20:498983397..49983415
+
Hg19:：chr20:499983423..49983431+电话：chr20:499983423..49983431
+
Hg19:：chr2:138989393..138989399+电话：chr2:138989393..138989399
+
Hg19:：chr2:138989408..138989420+电话：chr2:138989408..138989420
+
Hg19:：chr2:18479019..18479024+电话：chr2:18479019…18479024
+
Hg19:：chr2:18479033..18479051+电话：chr2:18479033..18479051
+
Hg19:：chr2:18479067..18479081+电话：chr2:18479067…18479081
+
Hg19:：chr2:18479137..18479145+电话：chr2:18479137..18479145
+
Hg19:：chr2:43364784..43364799-电话：chr2:43364784..43364799
-
Hg19:：chr2:43364874..43364891-电话：chr2:43364874..43364891
-
Hg19:：chr2:74069495..74069505+电话：chr2:74069495..74069505
+
Hg19:：chr3:170807661..170807666+电话：chr3:170807661..170807666
+
Hg19:：chr3:197205979..197205991+电话：chr3:197205979…197205991
+
Hg19:：chr3:197206040..197206047+电话：chr3:197206040..197206047
+
Hg19:：chr3:197206051..197206063+电话：chr3:197206051..197206063
+
Hg19:：chr4:100981084..100981089-电话：chr4:100981084..100981089
-
Hg19:：chr4:101018344..101018348-电话：chr4:101018344..101018348
-
Hg19:：chr4:173473985..173473989-p@基督4:173473985..173473989
-
Hg19:：chr4:180386691..180386698-p3@ENST00000512036
Hg19:：chr4:186854216..186854237-第23页@SORBS2
Hg19:：chr4:186854245..186854259-第51页@SORBS2
Hg19:：chr4:186854275..186854287-第39页@SORBS2
Hg19:：chr4:186854301..186854319-第44页@SORBS2
Hg19:：chr4:186854336..186854358-第41页@SORBS2
Hg19:：chr4:28429463..28429485+电话：chr4:28429463..28429485
+
Hg19:：chr4:28429607..28429619+电话：chr4:28429607..28429619
+
Hg19:：chr4:28429620..28429623+电话：chr4:28429620..28429623
+
Hg19:：chr4:28609492..28609496+电话：chr4:28609492…28609496
+
Hg19:：chr4:85791597..85791604-电话：chr4:85791597..85791604
-
Hg19:：chr5:135331152..135331163+电话：chr5:135331152..135331163
+
Hg19:：chr5:135540733.135540788-电话：chr5:135540733..135540788
-
Hg19:：chr5:135540818..135540823-电话：chr5:135540818..135540823
-
Hg19:：chr5:168213193..168213198-第5页第68213193页第168213198页
-
Hg19:：chr5:168213223..168213231-电话：chr5:168213223..168213231
-
Hg19:：chr5:168213234.168213245-电话：chr5:168213234..168213245
-
Hg19:：chr5:72708801..72708804+电话：chr5:72708801..72708804
+
Hg19:：chr5:72708814..72708824+电话：chr5:72708814..72708824
+
Hg19:：chr5:74964235..74964256+电话：chr5:74964235..74964256
+
Hg19:：chr5:79140618..79140625+电话：chr5:79140618..79140625
+
Hg19:：chr5:79140655..79140663+电话：chr5:79140655..79140663
+
Hg19:：chr6:132527234..132527248+电话：chr6:132527234..132527248
+
Hg19:：chr6:33749053..33749070-第2页@LEMD2
Hg19:：chr6:33749073..33749084-第6页@LEMD2
Hg19:：chr6:33749091..33749103-第4页@LEMD2
Hg19:：chr7:3284005..3284016-电话：chr7:3284005..3284016
-
Hg19:：chr7:3284027.3284034-电话：chr7:3284027..3284034
-
Hg19:：chr7:48080786..48080793+电话：chr7:48080786..48080793
+
Hg19:：chr7:48080805..48080813+电话：chr7:48080805..48080813
+
Hg19:：chr7:48080821..48080824+电话：chr7:48080821..48080824
+
Hg19:：chr7:48080850..48080853+电话：chr7:48080850..48080853
+
Hg19:：chr7:48080858..48080881+电话：chr7:48080858..48080881
+
Hg19:：chr7:48080895..48080908+电话：chr7:48080895..48080908
+
Hg19:：chr7:48080923..48080931+电话：chr7:48080923..48080931
+
Hg19:：chr7:48082461..48082477+电话：chr7:48082461..48082477
+
Hg19:：chr9:137617930..137617940+电话：chr9:137617930..137617940
+
Hg19:：chrX:134405649..134405699+p@chrX:134405649.134405699
+
Hg19:：chrX:134405722..134405726+邮政编码：134405722..134405726
+
Hg19:：chrX:139585644..139585652-电话：139585644..139585652
-
Hg19:：chrX:139587228..139587234-p1@SOX3


此共表达簇上的丰富路径<b>摘要：典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路，转录调控基因（下游靶点）是从Netpath获得的。综合起来，典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后，采用Benjamini-Hochberg方法对所得P值进行调整，以进行多重比较<br><b>分析师：Emmanuel Dimont链接到源数据集数据

此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要：共表达簇的GOStat分析结果。使用GOStat（PMID:14962934）和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师：Erik Arner链接到源数据集数据

GO标识GO名称FDR校正的p值
GO:0055078号钠离子稳态0.0497417642587206
GO:0017080号钠通道调节器活性0.0497417642587206
去：0006883细胞钠离子稳态0.0497417642587206
GO:0030104编号水平衡0.0497417642587206
GO:0018987号渗透调节0.0497417642587206
去：0032501多细胞生物过程0.0497417642587206
去：0007275多细胞生物发育0.0497417642587206
去：0002208免疫反应中免疫球蛋白的体细胞多样性0.0497417642587206
去：0002381免疫应答中免疫球蛋白的产生0.0497417642587206
GO:0002204号免疫应答中免疫球蛋白基因的体细胞重组0.0497417642587206
GO:0045190号同型转换0.0497417642587206
GO:0016447号免疫球蛋白基因片段的体细胞重组0.0497417642587206
去：0030004细胞单价无机阳离子稳态0.0497417642587206
GO:0016444号体细胞DNA重组0.0497417642587206
GO:0055067号单价无机阳离子稳态0.0497417642587206
GO:0016445号免疫球蛋白的体细胞多样性0.0497417642587206
去：0002562通过单基因座内生殖系重组实现免疫受体的体细胞多样性0.0497417642587206
去：0002200免疫受体的体细胞多样性0.0497417642587206
GO:0042176号蛋白质分解代谢过程的调控0.0497417642587206
去：0005637核内膜0.0497417642587206
转到：0045807内吞作用的正调节0.0497417642587206
去：0002377免疫球蛋白产生0.0497417642587206



此共同表达集群上的丰富示例本体术语<b>摘要：</b>为了总结1000个样本中的启动子活性（TSS区域的表达谱），我们基于FANTOM5样本本体（FF本体）进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题，我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式（TPM）。为了总结在这个共表达集群中丰富的本体，我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师：Hideya Kawaji链接到源数据集单元格_数据<br><br>疾病数据<br>

单元格类型
本体术语p值n个
少突胶质细胞1.78e-29页7
大胶质细胞1.78e-29页7
星形胶质细胞1.78e-29页7
少突胶质前体细胞1.78e-29页7
胶质细胞（感觉脊椎动物）4.22e-1315
胶质细胞4.22e-1315
成胶质细胞4.22e-1315
成胶质细胞（脊椎动物）4.22e-1315
神经元相关细胞6.95e-12号17
神经元相关细胞（感觉脊椎动物）2012年6月9日17
神经细胞8.32e-09年25
疾病
本体术语p值n个
神经系统癌6.76e-1811


此共表达簇上过度表达的TFBS（DNA）基序<b>摘要：</b>显示的值是该共表达簇中基序过度表达的p值。因此，较小的p值意味着强烈的过度代表性<b> 分析师：Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据

新颖的图案



JASPAR图案

Motifs公司-log10（p值）
MA0003.1号机组0
MA0004.1号机组0.0396783
MA0006.1号机组0.0332698
MA0007.1号机组0.00249845
MA0009.1号机组0.0594703
MA0014.1号2.89298e-16
MA0017.1号0.0143326
MA0019.1号0.0771638
MA0024.1号机组0.127497
MA0025.1号文件0.111659
MA0027.1号机组1.33752
MA0028.1号机组0.000128804
MA0029.1号机组0.5994
MA0030.1型1.29877
MA0031.1号文件0.225871
电话0038.10.118739
MA0040.1型0.339513
MA0041.1号1.45121
MA0042.1号1.81478
MA0043.1号0.215739
MA0046.1号0.451488
MA0048.1号5.12637e-05号
马0050.11.22001
MA0051.1号1.06698
MA0052.1号0.62259
MA0055.1号0.00277025
马0056.10
MA0057.1号2006年12月3日-06
MA0058.1号0.0228755
MA0059.1号0.0935014
马0060.10.00307258
MA0061.1号0.00555983
MA0063.1号0
MA0066.1号0.0153071
MA0067.1号0.211111
MA0068.1号0.0454699
马0069.12.1975
MA0070.1号2.71338
MA0071.1号0.886264
MA0072.1号1.12892
MA0073.1号8.32659e-09号
MA0074.1号0.00225856
MA0076.1号7.3246e-05年
MA0077.1号1.10186
MA0078.1号0.94305
MA0081.1号0.159546
MA0083.1号0.0619278
MA0084.1号0.898735
MA0087.1号1.57881
MA0088.1号0.000373771
马0089.10
MA0090.1号0.139966
MA0091.1号机组1.63536
MA0092.1号0.827044
MA0093.1号0.00654264
马0095.10
马0098.10
MA0100.1型0.0179189
MA0101.1号机组0.119714
MA0103.1号0.0536062
MA0105.1号2016年11月18日-07日
MA0106.1号0.00418723
MA0107.1号0.000226393
MA0108.2号0.424746
MA0109.1号0
MA0111.1号0.0922393
MA0113.1号0.0859225
MA0114.1号0.00221079
MA0115.1号0.16627
MA0116.1号0.2963
MA0117.1号0.538585
马0119.10.586286
MA0122.1号机组3.31496
MA0124.1号机组0.442689
MA0125.1号机组0.338455
MA0130.1号机组0
马0131.10.00938838
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.245279
MA0136.1号机组0.126221
MA0139.1号3.92361e-07
MA0140.1号机组0.0319303
MA0141.1号0.244275
MA0142.1号5.61005
MA0143.1号3.65134
MA0144.1号机组0.285324
MA0145.1号4.0804电子05
MA0146.1号6.17523e-09号
MA0147.1号0.00324431
MA0148.1号1.20088
MA0149.1号0.00111095
MA0062.2号4.12482e-06段
MA0035.2号0.279347
MA0039.2号3.82549e-13段
MA0138.2号机组0.116541
MA0002.2号机组0.961613
马0137.20.0501293
MA0104.2号0.000107514
MA0047.2号0.94572
MA0112.2号0.0511187
MA0065.2号2.05758e-05年
MA0150.1号机组1.29912
MA0151.1号0
MA0152.1号0.0344826
MA0153.1号机组0.0963486
MA0154.1号机组0.113371
MA0155.1号0.000678493
MA0156.1号机组0.00364992
MA0157.1号0.813147
MA0158.1号0
MA0159.1号机组0.035257
MA0160.1号0.236607
MA0161.1号机组0
MA0162.1号机组9.49863e-15号
MA0163.1号机组7.40164e-09年
MA0164.1号机组0.0951929
MA0080.2号0.0667236
马0018.20.495779
MA0099.2号机组18.396
MA0079.2号0
MA0102.2号机组0.366676
马0258.10.00641429
马0259.10.0102481
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要：</b>对于每个TF和每个共表达簇，使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后，保留了ChIP显著富集（q<=0.05）的聚类<br><b>分析师：Erik Arner链接到源数据集数据

（#promoters=该共表达簇中具有TF的ChIP信号的启动子数量）

TF公司#发起人丰富p值q值
FOS编号2353281.968302723820650.0003411936626312480.00346464996903694
6月#3725181.75961660517230.01348784951926610.0476396738456705
六月#3727291.584728549330150.007293398100102380.0301705233959121
NR3C1#2908号212.456511640270580.0001182526080925830.00160621461003788



共表达簇的相对表达<b>总结：</b>将共表达簇与FANTOM5样本进行比较，以获得相对表达<br><b>分析师：不适用<br><br>链接到数据源数据

检索自“http://f5-webapp4.gsc.riken.jp/resource_browser/index.php？title=Coexpression_cluster:C139&oldid=3067257"