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共表达簇以下为:136元

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完整id:C136_膜_extraskeletal_anaplastic_rhabdomyosaroma_cholangocellar_nonsmall_neuroexotoder



第一阶段CAGE峰值

Hg19::chr10:110407997..110408002+p@chr10:110407997.110408002
+
Hg19::chr10:123491370..123491379-电话:chr10:123491370..123491379
-
Hg19::chr10:21291623.第21291629页-电话:chr10:21291623..21291629
-
Hg19::chr10:22640320..22640328+电话:chr10:22640320..22640328
+
Hg19::chr10:29612487..29612499+电话:chr10:29612487..29612499
+
Hg19::chr10:29612546..29612580+电话:chr10:29612546..29612580
+
Hg19::chr10:29613031..29613036+电话:chr10:29613031..29613036
+
Hg19::chr10:29613050..29613060+电话:chr10:29613050..29613060
+
Hg19::chr10:29643287..29643316+电话:chr10:29643287..29643316
+
Hg19::chr10:52612862..52612869+电话:chr10:52612862..52612869
+
Hg19::chr10:54010532.54010547+电话:chr10:54010532..54010547
+
Hg19::chr10:54010561..54010562+电话:chr10:54010561..54010562
+
Hg19::chr10:54010629..54010641+电话:chr10:54010629..54010641
+
Hg19::chr10:54010664.54010675+电话:chr10:54010664..54010675
+
Hg19::chr10:54011381..54011388+电话:chr10:54011381..54011388
+
Hg19::chr10:54373384..54373394-电话:chr10:54373384..54373394
-
Hg19::chr10:54380431..54380438-电话:chr10:54380431..54380438
-
Hg19::chr10:54380494..54380526-电话:chr10:54380494..54380526
-
Hg19::chr10:54434202..54434206+电话:chr10:54434202..54434206
+
Hg19::chr10:54435392..54435398+电话:chr10:54435392..54435398
+
Hg19::chr10:54464025..54464030+电话:chr10:54464025..54464030
+
Hg19::chr10:95575127..95575132+电话:chr10:95575127..95575132
+
Hg19::chr10:95579364..95579367-电话:chr10:95579364..95579367
-
Hg19::chr11:111405448..111405452-电话:chr11:111405448..111405452
-
Hg19::chr11:44359184..44359192-电话:chr11:44359184..44359192
-
Hg19::chr11:84534461..84534473-电话:chr11:84534461…84534473
-
Hg19::chr11:9879819..9879831-电话:chr11:9879819..9879831
-
Hg19::chr11:9879844..9879867-p@克时11:9879844..98779867
-
Hg19::chr12:47578884..47578898-电话:chr12:47578884..47578898
-
Hg19::chr12:47686521..47686535-电话:chr12:47686521..47686535
-
Hg19::chr12:54651945..54651977-p10@CBX5
Hg19::chr12:54651996..54652005-p52@CBX5
Hg19::chr12:65915374..65915386-电话:chr12:65915374..65915386
-
Hg19::chr12:66414428..66414436-电话:chr12:66414428..66414436
-
Hg19::chr14:54712704..54712709-电话:chr14:54712704..54712709
-
Hg19::chr14:57540809..57540853-p@chr14:57540809..57540853
-
Hg19::chr14:57618195..57618202+电话:chr14:57618195..57618202
+
Hg19::chr14:68282778..68282790-p2@ZFYVE26
Hg19::chr14:68282796..68282809-第3页@ZFYVE26
Hg19::chr14:68282823..68282830-第6页@ZFYVE26
Hg19::chr14:68283075..68283091-第7页@ZFYVE26
Hg19::chr14:68283125..68283137-p5@ZFYVE26
Hg19::chr15:26342640..26342684+电话:chr15:26342640..26342684
+
Hg19::chr15:27111637..27111644+第20页@GABRA5
Hg19::chr15:35280823..35280852-p6@ZNF770
Hg19::chr15:35280863..35280908-p3@ZNF770
Hg19::chr15:67665298..67665308-电话:chr15:67665298…67665308
-
Hg19::chr16:25157665..25157701-第9页@LOC100506655
Hg19::chr16:25160074..25160087-第5页@LOC100506655
Hg19::chr16:25160169..25160182-第7页@LOC100506655
Hg19::chr16:83715826..83715852-电话:chr16:83715826..83715852
-
Hg19::chr16:83842046.83842058+电话:chr16:83842046..83842058
+
Hg19::chr16:83842085..83842095+电话:chr16:83842085..83842095
+
Hg19::chr16:83842136..83842184+电话:chr16:83842136..83842184
+
Hg19::chr18:22253484..22253496+电话:chr18:22253484..22253496
+
Hg19::chr18:3411569..3411590+第43页@TGIF1
Hg19::chr18:3411595..3411600+第62页@TGIF1
Hg19::chr18:3412005..3412009+第49页@TGIF1
Hg19::chr19:28480060..28480096-电话:chr19:28480060.28480096
-
Hg19::chr19:28480120..28480153-电话:chr19:28480120..28480153
-
Hg19::chr19:43519486..43519516-电话:chr19:43519486..43519516
-
Hg19::chr19:43821388..43821391-电话:chr19:43821388..43821391
-
Hg19::chr19:438666447..43866456+电话:chr19:43866447..43866456
+
Hg19::chr1:107328618..107328622-电话:chr1:107328618..107328622
-
Hg19::chr1:107495934..107495947+电话:chr1:107495934..107495947
+
Hg19::chr1:107495972..107495982+p@chr1:107495972..107495982
+
Hg19::chr1:874649..874655+第20页@SAMD11
Hg19::chr1:99904362..999904371-p@chr1:99904362..999904371
-
Hg19::chr21:30202677..30202680+电话:chr21:30202677..30202680
+
Hg19::chr22:49752643..49752667-电话:chr22:49752663..49752667
-
Hg19::chr22:49768853..49768884+电话:chr22:49768853..49768884
+
Hg19::chr22:497698834..4979843+电话:chr22:497698834..497769843
+
Hg19::chr22:497698867..49769888+电话:chr22:497698867..49769888
+
Hg19::chr22:497699903..497699910+p@chr22:49769903.49769910
+
Hg19::chr22:49769966..4976971+电话:chr22:497669966..4976971
+
Hg19::chr22:50024141..50024142+电话:chr22:50024142
+
Hg19::chr2:178466057..178466072+p@基督2:178466057.178466072
+
Hg19::chr2:178467784..178467793+p2@ENST00000357045
Hg19::chr2:178467806.178467810+第4页@ENST00000357045
Hg19::chr2:178467811..178467821+p1@ENST00000357045
Hg19::chr2:232030419..232030426+电话:chr2:232030419..232030426
+
Hg19::chr2:232030447..232030460+电话:chr2:232030447..232030460
+
Hg19::chr2:232030473..232030487+电话:chr2:232030473..232030487
+
Hg19::chr2:40548784..40548802-电话:chr2:40548784..40548802
-
Hg19::chr2:40680676..40680690-p6@SLC8A1
Hg19::chr3:115827500..115827509-电话:chr3:115827500..115827509
-
Hg19::chr3:128208278.128208291+第4页@ENST00000473958
Hg19::chr3:154361030..154361048-电话:chr3:154361030..154361048
-
Hg19::chr4:124464955..124464980+电话:chr4:124464955..124464980
+
Hg19::克时4:544047.4544060-第3页@STX18
Hg19::chr4:4544061..4544075-第4页@STX18
Hg19::chr4:65591752..65591762+电话:chr4:65591752..65591762
+
Hg19::chr4:65591771..65591789+电话:chr4:65591771..65591789
+
Hg19::chr4:65591798..65591800+电话:chr4:65591798..65591800
+
Hg19::chr5:74322467..74322473-电话:chr5:74322467..74322473
-
Hg19::chr5:74349970..74349983-电话:chr5:74349970..74349983
-
Hg19::chr5:74350271..74350287-电话:chr5:74350271..74350287
-
Hg19::chr5:74352282..74352286-电话:chr5:74352282..74352286
-
Hg19::chr5:75919142..75919153-p5@F2RL2
Hg19::chr5:75919253..75919269-第4页@F2RL2
Hg19::chr5:92111748..92111752-电话:chr5:92111748..92111752
-
Hg19::chr5:92112305..92112313-电话:chr5:92112305..92112313
-
Hg19::chr6:104996260..104996271-电话:chr6:104996260..104996271
-
Hg19::chr6:104996342..104996353-p@chr6:104996342..104996353
-
Hg19::chr6:122147424..122147433+电话:chr6:122147424..122147433
+
Hg19::chr6:57381063..57381070-电话:chr6:57381063..57381070
-
Hg19::chr7:135697276..135697294+电话:chr7:135697276..135697294
+
Hg19::chr7:135697298..135697309+电话:chr7:135697298..135697309
+
Hg19::chr7:135697397..135697402+电话:chr7:135697397..135697402
+
Hg19::chr7:151433200..151433217-第31页@PRKAG2
Hg19::chr7:25331046..25331057+电话:chr7:25331046..25331057
+
Hg19::chr7:25708292..25708320-p@chr7:25708292..25708320
-
Hg19::chr7:25878694..25878698+电话:chr7:25878694..25878698
+
Hg19::chr7:25886548..25886557+电话:chr7:25886548..25886557
+
Hg19::chr8:105235398..105235417+第28页@RIMS2
Hg19::chr8:105235550..105235571+p11@RIMS2(RIMS2)
Hg19::chr8:105235572.105235610+第4页@RIMS2
Hg19::chr8:105235613..105235625+第25页@RIMS2
Hg19::chr8:105235707..105235716+第18页@RIMS2
Hg19::chr8:105360173..105360177+电话:chr8:105360173..105360177
+
Hg19::chr8:105375900..105375904-电话:chr8:105375900..105375904
-
Hg19::chr8:115798994..115799001+电话:chr8:115798994..115799001
+
Hg19::chr8:127409534..127409543+电话:chr8:127409534..127409543
+
Hg19::chr8:127434688..127434698+电话:chr8:127434688..127434698
+
Hg19::chr8:127514281.127514286+电话:chr8:127514281..127514286
+
Hg19::chr8:95333973..95333982+电话:chr8:95333973…95333982
+
Hg19::chr9:129376456..129376465+p5@LMX1B
Hg19::chr9:3734564.3734569+p1@BC047388
Hg19::chr9:81579274..81579286+电话:chr9:81579274..81579286
+
Hg19::chr9:9972816..9972821-电话:chr9:9972816..9972821
-
Hg19::chrX:132090091..132090097+邮政编码:132090091..132090097
+
Hg19::chrX:132092649..132092662-p12@HS6ST2
Hg19::chrX:13469109..13469118+邮政编码:13469109..13469118
+
Hg19::chrY:18183164..18183170+邮政编码:18183164..18183170
+


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


无GOStat结果

此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集uberon_data(超级数据)<br><br>


优步解剖
本体术语p值n个
2009年4月34日26
肾间质2009年4月34日26
上尿路2009年4月34日26
肾原基2009年4月34日26
肾野2009年4月34日26
空泡复合器官2008年7月41日31


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组1.24138e-12号
MA0004.1号机组0.715591
MA0006.1号机组0.086095
MA0007.1号机组0.113
MA0009.1号机组0.438337
MA0014.1号1.49586e-07号
MA0017.1号0.471408
MA0019.1号0.278752
MA0024.1号机组0.114721
MA0025.1号文件0.103186
MA0027.1号机组1.3181
MA0028.1号机组0.000497354
MA0029.1号机组0.128256
MA0030.1型0.0290138
MA0031.1号文件0.0799094
电话0038.10.999293
MA0040.1型0.0327271
MA0041.1号0.0408779
MA0042.1号0.0264672
MA0043.1号0.0537497
MA0046.1号0.419958
MA0048.1号0.0112601
马0050.10.208075
MA0051.1号0.192455
MA0052.1号2.83026
MA0055.1号0.02362
马0056.10
MA0057.1号0.0083444
MA0058.1号0.315858
MA0059.1号0.438807
马0060.11.94594
MA0061.1号0.00720032
MA0063.1号0
MA0066.1号2.39785
MA0067.1号0.199375
MA0068.1号0.00281717
马0069.10.413533
MA0070.1号0.395123
MA0071.1号1.35348
MA0072.1号0.688548
MA0073.1号3.88624e-14号
MA0074.1号0.717758
MA0076.1号0.000492309
MA0077.1号0.0428262
MA0078.1号0.215788
MA0081.1号0.131553
MA0083.1号1.19788
MA0084.1号0.324478
MA0087.1号0.68245
MA0088.1号0.00387172
马0089.10
MA0090.1号0.029392
MA0091.1号机组0.95558
MA0092.1号0.263664
MA0093.1号0.907658
马0095.10
马0098.10
MA0100.1型0.014674
MA0101.1号机组0.230448
MA0103.1号0.26956
MA0105.1号0.0289212
MA0106.1号0.0201131
MA0107.1号0.0392762
MA0108.2号0.641573
MA0109.1号0
MA0111.1号0.0753842
MA0113.1号0.0239853
MA0114.1号0.0964326
MA0115.1号1.47245
MA0116.1号0.0113816
MA0117.1号0.233846
马0119.10.855246
MA0122.1号机组0.260087
MA0124.1号机组1.34112
MA0125.1号机组0.316678
MA0130.1号机组0
马0131.11.27858
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.22675
MA0136.1号机组0.540976
MA0139.1号6.54842e-06
MA0140.1号机组1.65618
MA0141.1号0.959203
MA0142.1号0.56224
MA0143.1号0.489926
MA0144.1号机组0.656154
MA0145.1号0.000443691
MA0146.1号2.41802e-09
MA0147.1号0.456231
MA0148.1号1.09417
MA0149.1号0.00612325
MA0062.2号4.22233电子05
MA0035.2号1.04221
MA0039.2号2.73221e-10
MA0138.2号机组0.385549
MA0002.2号机组0.0970797
马0137.20.192107
MA0104.2号0.323585
MA0047.2号1.84924
MA0112.2号0.227356
MA0065.2号0.00623681
MA0150.1号机组0.555456
MA0151.1号0
MA0152.1号1.70882
MA0153.1号机组0.297794
MA0154.1号机组0.00091224
MA0155.1号0.00354398
MA0156.1号机组0.126748
MA0157.1号0.286703
MA0158.1号0
MA0159.1号机组0.350011
MA0160.1号1.19298
MA0161.1号机组0
MA0162.1号机组2.39303e-09号
MA0163.1号机组6.24836e-06号
MA0164.1号机组0.328805
MA0080.2号0.0265755
马0018.20.147066
MA0099.2号机组0.598793
MA0079.2号0
MA0102.2号机组0.351955
马0258.11.63095
马0259.10.0913268
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


没有此群集的分析结果

共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据