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共表达簇:130元

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完整id:C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alvolar



第一阶段CAGE峰值

Hg19:：chr10:118084968..118084984+p@基督10:118084968..1180844984
+
Hg19:：chr10:118085003..118085010+电话：chr10:118085003..118085010
+
Hg19:：克时10:13390590..13390601-第13页@SEPHS1
Hg19:：chr10:53798976..53798977-电话：chr10:53798976..53798977
-
Hg19:：chr10:61899712..61899723+电话：chr10:61899712..61899723
+
Hg19:：chr10:6830164..6830166-电话：chr10:6830164.6830166
-
Hg19:：chr10:74804784..74804793-电话：chr10:74804784..74804793
-
Hg19:：chr10:92567391..92567407+电话：chr10:92567391..92567407
+
Hg19:：chr11:131123319..131123338+p1@ENST00000416553
Hg19:：chr11:64016117..64016151-电话：chr11:64016117..64016151
-
Hg19:：chr11:64016224..64016227-电话：chr11:64016224..64016227
-
Hg19:：chr11:94383510..94383526+电话：chr11:94383510..94383526
+
Hg19:：chr11:94383593..94383614+电话：chr11:94383593..94383614
+
Hg19:：chr12:11762229.第11762247页+电话：chr12:11762229..11762247
+
Hg19:：chr12:132280681..132280688+第3页@SFSWAP
Hg19:：chr12:23738971..23738975+电话：chr12:23738971..23738975
+
Hg19:：chr12:6646472..6646496+第18页@GAPDH
Hg19:：chr12:7942020..7942031+p2@NANOG（南奥）
Hg19:：chr12:89346452..89346459+电话：chr12:89346452..89346459
+
Hg19:：chr12:9067123..9067159+p4@PHC1
Hg19:：chr12:9067338..9067352+p9@原发性肝癌1
Hg19:：chr13:41495638..41495642+电话：chr13:41495638..41495642
+
Hg19:：chr13:434382216..4348239-电话：chr13:434382216..4343839
-
Hg19:：chr13:51743748..51743762+电话：chr13:51743748..51743762
+
Hg19:：chr13:51745257..51745261+电话：chr13:51745257..51745261
+
Hg19:：chr14:105634536..105634543+电话：chr14:105634536..105634543
+
Hg19:：chr14:21776910..21776928-电话：chr14:21776910..21776928
-
Hg19:：chr14:38660185..38660188+p1@ENST00000555655
Hg19:：chr14:84428225..84428229+电话：chr14:84428225..84428229
+
Hg19:：chr15:100980707..100980708+电话：chr15:100980707..100980708
+
Hg19:：chr15:25219499..25219545+第7页@SNRPN
Hg19:：chr15:25223016..25223033+电话：chr15:25223016..25223033
+
Hg19:：chr15:40731985..40732002+第17页@BAHD1
Hg19:：chr15:41907429..41907432+p1@ENST00000478625
Hg19:：chr15:56363634..56363673+电话：chr15:56363634..56363673
+
Hg19:：chr15:56363776..56363799+电话：chr15:56363776..56363799
+
Hg19:：chr15:56364190..56364209+电话：chr15:56364190..56364209
+
Hg19:：chr15:56364413..56364448+电话：chr15:56364413..56364448
+
Hg19:：chr15:563644458..56364485+p@chr15:56364458..56364485
+
Hg19:：chr15:56365001..56365013+电话：chr15:56365001..56365013
+
Hg19:：chr15:56365091.56365112+电话：chr15:56365091..56365112
+
Hg19:：chr15:56365189..56365204+电话：chr15:56365189..56365204
+
Hg19:：chr15:56365882..56365895+电话：chr15:56365882..56365895
+
Hg19:：chr15:78635894..78635913+电话：chr15:78635894..78635913
+
Hg19:：chr16:29720498..29720506+电话：chr16:29720498..29720506
+
Hg19:：chr16:29720511..29720528+电话：chr16:29720511..29720528
+
Hg19:：chr16:29740207..29740210+电话：chr16:29740207..29740210
+
Hg19:：chr16:3064994..3065011-电话：chr16:3064994..3065011
-
Hg19:：chr16:3065277..3065296-电话：chr16:3065277..3065296
-
Hg19:：chr16:30876603..30876606+电话：chr16:30876603..30876606
+
Hg19:：chr16:69139543..69139585+p2@HAS3
Hg19:：chr16:9761290.9761294-电话：chr16:9761290..9761294
-
Hg19:：chr16:9768264..9768287+电话：chr16:9768264.9768287
+
Hg19:：chr17:80030062..80030069+电话：chr17:80030062..80030069
+
Hg19:：chr19:3028439..3028443-电话：chr19:3028439..3028443
-
Hg19:：chr19:33542309..33542310+p1@ENST00000463585
Hg19:：chr19:54335755..54335775+电话：chr19:54335755..54335775
+
Hg19:：chr1:114574998..114575000+电话：chr1:114574998..114575000
+
Hg19:：chr1:155561105..155561109-p1@ENST00000427475
Hg19:：chr1:18624811..18624839-电话：chr1:18624811..18624839
-
Hg19:：chr1:20034323..200343245-p3@C1或98
Hg19:：chr1:200380793..200380807+p2@uc010ppi.1
Hg19:：chr1:223202511..223202515-电话：chr1:223202511..223202515
-
Hg19:：chr1:226076843..226076847-p2@左Y1
Hg19:：chr1:232254205..232254216+电话：chr1:232254205..232254216
+
Hg19:：chr1:46073030..46073040-p@chr1:46073030..460773040
-
Hg19:：chr1:46073987..46074014-电话：chr1:46073987..46074014
-
Hg19:：chr1:55505132..55505142+p3@PCSK9
Hg19:：chr1:63787595..63787617-p3@ENST00000426393
Hg19:：chr20:12735430..12735434+电话：chr20:12735430..12735434
+
Hg19:：chr20:12738186..12738216+电话：chr20:12738186..12738216
+
Hg19:：chr20:31372591.31372603+电话：chr20:31372591..31372603
+
Hg19:：chr20:31374351..31374362+电话：chr20:31374351..31374362
+
Hg19:：chr20:31380524..31380554+电话：chr20:31380524..31380554
+
Hg19:：chr20:31396411..31396416+p15@DNMT3B
Hg19:：chr20:50399087..50399088-电话：chr20:50399087..50399088
-
Hg19:：chr2:188430524..188430535-第20页，TFPI
Hg19:：chr2:193404441..193404444+电话：chr2:193404441..193404444
+
Hg19:：chr2:2002896813.第202896824页+电话：chr2:202896813..202896824
+
Hg19:：chr2:210164412..210164415+电话：chr2:210164412..210164415
+
Hg19:：chr2:64479926..64479928+电话：chr2:64479926..64479928
+
Hg19:：chr2:77316400..77316420+电话：chr2:77316400..77316420
+
Hg19:：chr3:109046043..109046063-电话：chr3:109046043..109046063
-
Hg19:：chr3:112140140..112140170-电话：chr3:112140140..112140170
-
Hg19:：chr3:162435939..162435944+电话：chr3:162435939..162435944
+
Hg19:：chr3:176044846..176044854-电话：chr3:176044846..176044854
-
Hg19:：chr3:38527183..38527189+电话：chr3:38527183..38527189
+
Hg19:：chr3:46616017..46616032+第2页@TDGF1
Hg19:：chr3:46618727..46618745+第3页@TDGF1
Hg19:：chr3:54672960.54672982-电话：chr3:54672960..54672982
-
Hg19:：chr3:65939393..65939412+电话：chr3:65939393..65939412
+
Hg19:：chr4:113566800..113566805+电话：chr4:113566800..113566805
+
Hg19:：chr4:113569853..113569862-p1@ENST00000505215
p1@ENST00000509938
Hg19:：chr4:113571661..113571692-p1@ENST00000510655
Hg19:：chr4:113573659..113573683+电话：chr4:113573659..113573683
+
Hg19:：chr4:150954096..150954098+电话：chr4:150954096..150954098
+
Hg19:：chr4:155665927.155665934+p4@轻轨
Hg19:：chr4:180090669..180090673-电话：chr4:180090669..180090673
-
Hg19:：chr4:187163408.187163430+电话：chr4:187163408…187163430
+
Hg19:：chr4:187163434..187163439+电话：chr4:187163434..187163439
+
Hg19:：chr4:187171657..187171667+电话：chr4:187171657…187171667
+
Hg19:：chr4:188918405..188918406+p@基督4:188918405..188918406
+
Hg19:：chr4:379933..379948+电话：chr4:379933…379948
+
Hg19:：克时4:5748618.57458624+电话：chr4:57458618..57458624
+
Hg19:：chr4:62635359..62635371-电话：chr4:62635359..62635371
-
Hg19:：chr5:120035355..120035366-电话：chr5:120035355..120035366
-
Hg19:：chr5:123833031..123833035+电话：chr5:123833031…123833035
+
Hg19:：chr5:142082957..142082972+电话：chr5:142082957..142082972
+
Hg19:：chr5:147248693..147248701-电话：chr5:147248693..147248701
-
Hg19:：chr5:80501452..80501465+p1@RNU5D-1
第1页@RNU5E-1
Hg19:：chr6:121759714..121759721+电话：chr6:121759714..121759721
+
Hg19:：chr6:132224075..132224083+电话：chr6:132224075..132224083
+
Hg19:：chr6:132234089..132234094+电话：chr6:132234089..132234094
+
Hg19:：chr6:15487707..15487724+电话：chr6:15487707..15487724
+
Hg19:：chr6:18759117..18759122-电话：chr6:18759117..18759122
-
Hg19:：chr6:33084446..33084462+p@chr6:3084446.33084462
+
Hg19:：chr6:71377348..71377355+第10页@SMAP1
Hg19:：chr6:77271226..77271236+电话：chr6:77271226..77271236
+
Hg19:：chr7:121715171..121715176-电话：chr7:121715171..121715176
-
Hg19:：chr7:138144581..138144590-电话：chr7:138144581..138144590
-
Hg19:：chr7:51395308..51395318+电话：chr7:51395308..51395318
+
Hg19:：chr7:83090055.83090066+电话：chr7:83090055..83090066
+
Hg19:：chr7:89853761..89853768+电话：chr7:89853761..89853768
+
Hg19:：chr7:93269596..93269602+电话：chr7:93269596..93269602
+
Hg19:：chr7:99986543.99986546+电话：chr7:99986543.99986546
+
Hg19:：chr8:115308332..115308341+电话：chr8:115308332..115308341
+
Hg19:：chr8:128428066..128428078+p1@POU5F1B处
Hg19:：chr8:494169..494176+电话：chr8:494169..494176
+
Hg19:：chr8:61852178..61852208+电话：chr8:61852178..61852208
+
Hg19:：chr8:72587586..72587591+p1@ENST00000521131
Hg19:：chr8:73958509..73958513+电话：chr8:73958509..73958513
+
Hg19:：chr9:12948720..12948724+电话：chr9:12948720..12948724
+
Hg19:：chr9:76707423..76707428+电话：chr9:76707423..76707428
+
Hg19:：chrX:16141667..16141707+p1@GRPR
Hg19:：chrX:2719421..2719424-电话：2719421..2719424
-
Hg19:：chrX:70288369..70288404-第3页@SNX12
Hg19:：chrX:83004216..83004220-电话：83004216..83004220
-
Hg19:：chrX:91359700..91359713-p1@ENST00000540909
p1@uc004efp.1页
Hg19:：chrX:91359754..91359757-p2@ENST00000540909
p2@uc004参考第1页


此共表达簇上的丰富路径<b>摘要：典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路，转录调控基因（下游靶点）是从Netpath获得的。综合起来，典型途径和下游靶点总计489个人类基因集。使用同源基因数据库通过同源性推断出相应的肌肉分枝杆菌基因集。通过超几何概率评估共表达簇中包含的每个典型489条路径和基因集的富集情况。然后，采用Benjamini-Hochberg方法对所得P值进行调整，以进行多重比较<br><b>分析师：Emmanuel Dimont链接到源数据集数据

此共表达没有结果

此共表达簇上的丰富基因本体术语<b>摘要：共表达簇的GOStat分析结果。使用GOStat（PMID:14962934）和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师：Erik Arner链接到源数据集数据

GO标识GO名称FDR校正的p值
去：0032870细胞对激素刺激的反应0.0466266336983398
GO:0032869号细胞对胰岛素刺激的反应0.0466266336983398
GO:0047173号磷脂酰胆碱-维生素O酰基转移酶活性0.0466266336983398
去：0008326位点特异性DNA-甲基转移酶（胞嘧啶特异性）活性0.0466266336983398



此共同表达集群上的丰富示例本体术语<b>摘要：</b>为了总结1000个样本中的启动子活性（TSS区域的表达谱），我们基于FANTOM5样本本体（FF本体）进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题，我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式（TPM）。为了总结在这个共表达集群中丰富的本体，我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师：Hideya Kawaji链接到源数据集单元格_数据<br>uber_数据<br>疾病数据<br>

单元格类型
本体术语p值n个
胚胎干细胞1.01e-705
神经元1.97e-226
神经母细胞1.97e-226
电信号电池1.97e-226
生殖系细胞1.48e-187
生殖细胞1.48e-187
神经干细胞5.37e-17页8
黑素细胞1.90e-13号机组10
成黑素细胞1.90e-13号机组10
色素细胞8.96电子-1014
神经外胚层细胞3.17e-08年59
神经外胚层细胞2007年5月34日20
优步解剖学
本体术语p值n个
睾丸2.53e-168
男性生殖器官4.77e-12段11
性腺6.34e-11号文件21
冷漠的外生殖器2011年6月4日21
无性腺6.34e-11号文件21
性腺原基6.34e-11号文件21
外生殖器1.93e-10号机组22
疾病
本体术语p值n个
生殖细胞与胚胎癌7.62e-16页22
生殖细胞癌7.62e-16页22


此共表达簇上过度表达的TFBS（DNA）基序<b>摘要：</b>显示的值是该共表达簇中基序过度表达的p值。因此，较小的p值意味着强烈的过度代表性<b> 分析师：Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据

新颖的图案



JASPAR图案

主题-log10（p值）
MA0003.1号机组5.73775e-15
MA0004.1号机组0.00206588
MA0006.1号机组0.116725
MA0007.1号机组1.50463
MA0009.1号机组0.184881
MA0014.1型2.33723e-09号
MA0017.1号0.0421896
MA0019.1号0.625415
MA0024.1号机组0.105081
MA0025.1号机组0.0966747
MA0027.1号机组1.30259
MA0028.1号机组0.00475625
MA0029.1号机组0.523768
马0030.10.110209
MA0031.1号文件0.072248
MA0038.1号0.0897108
MA0040.1型1.67096
MA0041.1号0.24706
MA0042.1号3.75009
MA0043.1号0.185158
MA0046.1号0.395528
MA0048.1号2014年9月9日至05日
马0050.10.289724
MA0051.1号0.665293
MA0052.1号0.545567
MA0055.1号0.00163221
马0056.10
MA0057.1号0.353198
MA0058.1号0.000238717
马0059.10.00127211
马0060.13.6508电子05
MA0061.1型0.156604
MA0063.1号0
MA0066.1型0.178825
MA0067.1号0.190212
MA0068.1号0.0541249
MA0069.1号0.389286
MA0070.1号1.02947
MA0071.1号0.985343
MA0072.1号0.364342
MA0073.1号4.61825e-10段
MA0074.1号1.18292
MA0076.1号0.0186176
MA0077.1号0.152998
MA0078.1号0.196031
MA0081.1号0.0628421
MA0083.1号0.0514565
MA0084.1号0.313207
MA0087.1号1.00599
MA0088.1号7.48404e-05号
MA0089.1号0
马0090.11.3693
MA0091.1号机组1.39469
MA0092.1号0.496173
MA0093.1号3.59406电子05
MA0095.1号0
MA0098.1号0
MA0100.1型0.102245
MA0101.1号机组0.0223386
MA0103.1号2.04881
MA0105.1号0.0295282
MA0106.1号0.129979
MA0107.1号0.0529835
MA0108.2号5.56344
MA0109.1号0
MA0111.1号0.299005
MA0113.1号0.14853
MA0114.1号0.119371
MA0115.1号0.147682
MA0116.1号0.0330304
MA0117.1号0.0607969
MA0119.1号0.146634
马0122.10.0695762
马0124.10.795162
MA0125.1号机组0.299757
MA0130.1号机组0
MA0131.1号机组0.104303
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.212475
MA0136.1号机组0.095958
MA0139.1号0.00288699
MA0140.1号机组7.80874
MA0141.1号0.10875
马0142.110.2407
MA0143.1号5.47023
MA0144.1号机组0.263435
MA0145.1号0.0588186
MA0146.1号0.000130642
MA0147.1号2.17774e-05
MA0148.1号0.399497
马0149.10.488476
马0062.20.000269651
MA0035.2号10.3622
MA0039.2号0.00676531
MA0138.2号机组0.0307043
MA0002.2号机组0.0168923
MA0137.2号机组0.346194
MA0104.2号1985年7月25日-06日
MA0047.2号0.569495
MA0112.2号0.00863397
MA0065.2号0.153202
MA0150.1号机组0.0477956
MA0151.1型0
MA0152.1号0.75958
MA0153.1号机组0.281374
MA0154.1号机组0.00637974
马0155.10.0207986
MA0156.1号机组0.00588225
MA0157.1号0.263384
MA0158.1号0
马0159.11.15077
马0160.10.635171
MA0161.1号机组0
MA0162.1型1.78135e-10
MA0163.1号机组3.81439e-06号
MA0164.1号机组1.3109
MA0080.2号0.00916313
MA0018.2号0.131488
MA0099.2号机组0.024065
MA0079.2号19627年8月7日
MA0102.2号机组0.340338
马0258.10.300573
马0259.10.116201
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要：</b>对于每个TF和每个共表达簇，使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后，保留了ChIP显著富集（q<=0.05）的聚类<br><b>分析师：Erik Arner链接到源数据集数据

（#promoters=该共表达簇中具有TF的ChIP信号的启动子数量）

TF公司#发起人丰富p值q值
南奥#79923245.049458154994997.33000878949244e-11号8.06679439373868e-09
POU5F1#54601024.13231665121621.93039694695569e-112.32000836298164e-09
TAF7号6879252.056307446928760.0004233126616163930.00395972692042584



共表达簇的相对表达<b>总结：</b>将共表达簇与FANTOM5样本进行比较，以获得相对表达<br><b>分析师：</b>NA<br><br>数据源链接<br>数据

检索自“http://f5-webapp4.gsc.riken.jp/resource_browser/index.php？title=Coexpression_cluster:C130&oldid=3067248”