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共表达簇以下为:127元

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完整id:C127_maxillary_small_hepatoblastoma_hepatocellar_alveolar_colon_argyrophil



第一阶段CAGE峰值

Hg19::chr10:111171762..111171773-电话:chr10:111171762..111171773
-
Hg19::chr10:115327155..115327166+p5@HABP2
Hg19::chr10:115939099..115939117+p2@TDRD1
Hg19::chr10:115999510..115999521+VWA2时为p5
Hg19::chr10:1895618..1895626+p@基督10:1895618..18955626
+
Hg19::chr10:72576444..72576454+第12页@SGPL1
Hg19::chr10:72576468..72576497+第2页@SGPL1
Hg19::chr10:72576503..72576516+第11页@SGPL1
Hg19::chr10:72576547..72576568+p10@SGPL1
Hg19::chr11:36489757..36489777+电话:chr11:36489757..36489777
+
Hg19::chr11:69633471..69633482+电话:chr11:69633471..69633482
+
Hg19::chr11:69633974..69633997-p1@FGF3
Hg19::chr11:69634335..69634346-第6页@FGF3
Hg19::chr11:69634506..69634517-第5页@FGF3
Hg19::chr11:71939032..71939040+第23页@INPPL1
Hg19::chr11:78177177..78177186-电话:chr11:78177177..78177186
-
Hg19::chr12:130617921..130617932+电话:chr12:130617921..130617932
+
Hg19::chr12:130617944..130617953+电话:chr12:130617944..130617953
+
Hg19::chr12:130822499..130822514+p5@PIWIL1
Hg19::chr12:130822519..130822529+第7页@PIWIL1
Hg19::chr12:79406759..79406766+电话:chr12:79406759..79406766
+
Hg19::chr12:79611340..79611358+p1@AB384875
Hg19::chr12:79611372..79611384+p2@AB384875
Hg19::chr12:92247545..92247559-电话:chr12:92247545..92247559
-
Hg19::chr12:92247594..92247605-电话:chr12:92247594..92247605
-
Hg19::chr12:92247611..92247618-电话:chr12:92247611..92247618
-
Hg19::chr12:92247626..92247635-电话:chr12:92247626..92247635
-
Hg19::chr12:92247725..92247764+电话:chr12:92247725..92247764
+
Hg19::chr13:101081145..101081150+电话:chr13:101081145..101081150
+
Hg19::chr14:106922517..106922528-电话:chr14:106922517..106922528
-
Hg19::chr14:51338763..51338776+p3@ABHD12B
Hg19::chr14:51338801..51338814+p2@ABHD12B
Hg19::chr14:51338816..51338857+p1@ABHD12B
Hg19::chr14:61952109..61952155+电话:chr14:61952109..61952155
+
Hg19::chr14:79331180..79331190+电话:chr14:79331180..79331190
+
Hg19::chr14:79331221..79331232+电话:chr14:79331221..79331232
+
Hg19::chr14:79331250..79331261+p@chr14:79331250..79331261
+
Hg19::chr14:79331318..79331327+电话:chr14:79331318…79331327
+
Hg19::chr14:79502968..79502972+电话:chr14:79502968…79502972
+
Hg19::chr15:46241272..46241278+电话:chr15:46241272..46241278
+
Hg19::chr15:4628024..46282028+电话:chr15:46282024..462282028
+
Hg19::chr15:4631623..46316627+电话:chr15:4631623..46316627
+
Hg19::chr15:46351173..46351173+p@chr15:46351173..46351177
+
Hg19::chr15:464999592..46499596+电话:chr15:46499596
+
Hg19::chr15:46595297..46595301+电话:chr15:46595297..46595301
+
Hg19::chr15:67649625..67649632+p10@IQCH(IQCH)
Hg19::chr15:67649672..67649692+第4页@IQCH
Hg19::chr16:50539857..50539869+电话:chr16:50539857..50539869
+
Hg19::chr16:50539874..50539887+电话:chr16:50539874..50539887
+
Hg19::chr16:50581680..50581691+p@chr16:50581680..50581691
+
Hg19::chr16:50581702..50581732+电话:chr16:50581702..50581732
+
Hg19::chr16:50582222..50582230+第2页@NKD1
Hg19::chr16:50582298..50582316+p1@NKD1
Hg19::chr16:68420720..68420727-电话:chr16:68420720..68420727
-
Hg19::chr17:17529513..17529535-电话:chr17:17529513..17529535
-
Hg19::chr17:17529540.17529545-电话:chr17:17529540..17529545
-
Hg19::chr17:69077405..69077409+电话:chr17:69077405..69077409
+
Hg19::chr17:79974342..79974365+电话:chr17:79974342..79974365
+
Hg19::chr17:908734..908738+p3@BC129815
Hg19::chr17:908765..908774+第2页@BC129815
Hg19::chr18:37322033..37322043+电话:chr18:37322033..37322043
+
Hg19::chr18:8625916..8625925+电话:chr18:8625916..8625925
+
Hg19::chr19:36222531..36222539+电话:chr19:36222531…36222539
+
Hg19::chr19:46518842..46518860+电话:chr19:46518842..46518860
+
Hg19::chr19:46519977..46519985-电话:chr19:46519977..46519985
-
Hg19::chr19:46580353..46580358-p1@AK057802
Hg19::chr19:46580361..46580396-p2@ENST00000366172
p2@uc002pdz.1
Hg19::chr19:46580415..46580420-p10@ENST00000366172
p10@uc002pdz.1
Hg19::chr19:46580452..46580460-第9页@ENST00000366172
第9页@uc002pdz.1
Hg19::chr19:46580826..46580845-p3@ENST00000366172
第3页@uc002pdz.1
Hg19::chr19:46580912..46580923-第4页@ENST00000366172
第4@uc002pdz.1页
Hg19::chr1:11000123..11000131-电话:chr1:11000123..11000131
-
Hg19::chr1:172613350..172613353+电话:chr1:172613350..172613353
+
Hg19::chr1:213822723.第213822727页-电话:chr1:213822723..213822727
-
Hg19::chr1:213822756..213822765-电话:chr1:213822756..213822765
-
Hg19::chr20:33565400..33565413+第7页@MYH7B
Hg19::chr20:36470640..36470649+第6页@CTNNBL1
Hg19::chr20:36470708..36470717+第10页@CTNNBL1
Hg19::chr20:36470727..36470734+第11页@CTNNBL1
Hg19::chr20:5681874..5681885+电话:chr20:5681874..5681885
+
Hg19::chr21:46193671..46193689-p9@UBE2G2
Hg19::chr21:46194934..46194979-p17@UBE2G2
Hg19::chr2:175389279..175389282+电话:chr2:175389279..175389282
+
Hg19::chr2:223043326..223043344-电话:chr2:223043326..223043344
-
Hg19::chr2:99909329.99909333-电话:chr2:99909329…99909333
-
Hg19::chr3:11675723..11675735-p@基督3:11675723.第11675735页
-
Hg19::chr3:11675748..11675759-电话:chr3:11675748..11675759
-
Hg19::chr3:11675763..11675778-电话:chr3:11675763..11675778
-
Hg19::chr3:129690202..129690210-电话:chr3:129690202..129690210
-
Hg19::chr3:137483141..137483162+第1页@SOX14
Hg19::chr3:193656555..193656579-电话:chr3:193656555..193656579
-
Hg19::chr3:193678383..193678395+p@chr3:193678383..193678395
+
Hg19::chr3:195943343..195943360+p3@OSTα
Hg19::chr3:52643526..52643537-第8页@PBRM1
Hg19::chr3:86926149..86926150+电话:chr3:86926149..86926150
+
Hg19::chr3:95928627..95928643-电话:chr3:95928627..95928643
-
Hg19::chr3:95928653..95928656-电话:chr3:95928653..95928656
-
Hg19::chr3:95928667..95928672-电话:chr3:95928667..95928672
-
Hg19::chr3:95928676.95928681-p@chr3:95928676.95928681
-
Hg19::chr3:95928689..95928701-电话:chr3:95928689..95928701
-
Hg19::chr4:16460563..16460585+电话:chr4:16460563..16460585
+
Hg19::chr5:115481500..115481504+电话:chr5:115481500..115481504
+
Hg19::chr5:146939412..146939419+第2页@LOC153469
Hg19::chr5:146939429..146939436+p3@LOC153469
Hg19::克时5:16737865..16737876-电话:chr5:16737865..16737876
-
Hg19::chr5:175298205..175298209-电话:chr5:175298205..175298209
-
Hg19::chr5:175298256..175298267-电话:chr5:175298256..175298267
-
Hg19::chr6:138428938..138428953-p8@性能
Hg19::chr6:138428975..138428985-p13@性能
Hg19::chr6:56507200..56507216-电话:chr6:56507200..56507216
-
Hg19::chr6:56507254..56507276-电话:chr6:56507254..56507276
-
Hg19::chr7:120778392..120778412-电话:chr7:120778392..120778412
-
Hg19::chr7:120789549..120789552+p44@C7或58
Hg19::chr7:120789556..120789585+p11@C7或58
Hg19::chr7:120789593..120789628+p10@C7或58
Hg19::chr7:123634848..123634862+p1@uc010lkv.1
Hg19::chr7:47728559..47728598+电话:chr7:47728559..47728598
+
Hg19::chr7:80086544..80086546-电话:chr7:80086544..80086546
-
Hg19::chr7:80141328..80141339-第2页@GNAT3
Hg19::chr7:80141358..80141392-第1页@GNAT3
Hg19::chr7:80141406..80141411-第3页@GNAT3
Hg19::chr7:93169246..93169258+电话:chr7:93169246..93169258
+
Hg19::chr8:117816627..117816634+电话:chr8:117816627..117816634
+
Hg19::chr8:117816648..117816663+p@基督8:117816648..117816663
+
Hg19::chr8:48079099..48079105-电话:chr8:48079099..48079105
-
Hg19::chr8:48079110..48079116-电话:chr8:48079110..48079116
-
Hg19::chr8:74985038..74985063+电话:chr8:74985038..74985063
+
Hg19::chr9:11935598..11935637+电话:chr9:11935598..11935637
+
Hg19::chr9:135932153..135932160+电话:chr9:135932153..135932160
+
Hg19::chr9:140335777..140335785-第3页@ENTPD8
Hg19::chr9:140335789..140335818-第1页@ENTPD8
Hg19::chr9:140348364..140348386-电话:chr9:140348364..140348386
-
Hg19::chr9:140348397..140348421-电话:chr9:140348397..140348421
-
Hg19::chr9:140348438..140348460-电话:chr9:140348438..140348460
-
Hg19::chrX:10645724..10645735-第12页@MID1
Hg19::chrX:11455274..11455297-电话:11455274..11455297
-
Hg19::chrX:1146430..11460434-p@chrX:11460430..11460434
-
Hg19::chrX:11502792..11502801-电话:11502792..11502801
-
Hg19::chrX:11502822..11502831-电话:11502822..11502831
-
Hg19::chrX:11503012..11503022-p@chrX:11503012..11503022
-
Hg19::chrX:151620193..151620201-第4页@GABRA3


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


无GOStat结果

此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集uberon_data(超级数据)<br>疾病数据<br>


优步解剖
本体术语p值n个
上颌窦9.37至991
鼻窦9.37至991
疾病
本体术语p值n个
副鼻窦癌9.37至991
上颌窦癌9.37至991
肺小细胞癌7.14e-264
呼吸系统癌7.63e-26页16
支气管癌1.91e-15号机组7
支气管癌1.91e-15号机组7
肺癌2.45e-12段9
肺癌5.93e-08年15


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组6.22053e-05
MA0004.1号机组0.454186
MA0006.1号机组0.00760704
MA0007.1号机组0.260564
MA0009.1号机组0.403855
MA0014.1号0.000163729
MA0017.1号0.532149
MA0019.1号0.606462
MA0024.1号机组0.101461
MA0025.1号文件1.07737
MA0027.1号机组1.29654
MA0028.1号机组0.00424248
MA0029.1号机组0.275146
MA0030.1型0.78158
MA0031.1号文件1.24161
电话0038.10.661073
MA0040.1型0.0283962
MA0041.1号0.942841
MA0042.1号0.568447
MA0043.1号0.0477117
MA0046.1号0.170565
MA0048.1号0.148332
马0050.10.0986488
MA0051.1号0.0817223
MA0052.1号0.120708
MA0055.1号3.11752e-05年
马0056.10
MA0057.1号0.122252
MA0058.1号0.673715
MA0059.1号0.850294
马0060.10.00583527
MA0061.1号0.1011
MA0063.1号0
MA0066.1号0.459039
MA0067.1号0.186693
MA0068.1号0.0309756
马0069.10.380024
MA0070.1号0.362367
MA0071.1号0.119319
MA0072.1号0.154556
MA0073.1号0.000108236
MA0074.1号0.641227
MA0076.1号0.00171159
MA0077.1号0.969146
MA0078.1号0.791832
MA0081.1号0.851428
MA0083.1号0.049764
MA0084.1号0.308852
MA0087.1号0.15261
MA0088.1号0.663723
马0089.10
MA0090.1号1.0827
MA0091.1号机组0.00860926
MA0092.1号0.844365
MA0093.1号0.963711
马0095.10
马0098.10
MA0100.1型0.0017642
MA0101.1号机组0.0202807
MA0103.1号3.89517
MA0105.1号0.0164424
MA0106.1号0.00260729
MA0107.1号0.121542
MA0108.2号0.586024
MA0109.1号0
MA0111.1号0.954994
MA0113.1号0.651066
MA0114.1号0.408217
MA0115.1号0.144573
MA0116.1号0.262976
MA0117.1号0.21381
马0119.10.430946
MA0122.1号机组0.513571
MA0124.1号机组0.391442
MA0125.1号机组0.293279
MA0130.1号机组0
马0131.10.0999496
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.0566312
MA0136.1号机组0.309908
MA0139.1号0.0176407
MA0140.1号机组0.116203
MA0141.1号0.101711
MA0142.1号0.148052
MA0143.1号0.910473
MA0144.1号机组0.0508213
MA0145.1号2.58376
MA0146.1号0.00092196
MA0147.1号0.138564
MA0148.1号2.56995
MA0149.1号0.470569
MA0062.2号0.000609704
MA0035.2号0.702364
MA0039.2号0.704969
MA0138.2号机组0.190279
MA0002.2号机组0.959694
马0137.20.0955066
MA0104.2号0.0212216
MA0047.2号2.08291
MA0112.2号0.237244
MA0065.2号0.0582188
MA0150.1号机组1.53494
MA0151.1号0
MA0152.1号0.222288
MA0153.1号机组0.0803324
MA0154.1号机组0.00526352
MA0155.1号0.188564
MA0156.1号机组0.0135511
MA0157.1号0.122472
MA0158.1号0
MA0159.1号机组0.76039
MA0160.1号0.285507
MA0161.1号机组0
MA0162.1号机组0.000551796
MA0163.1号机组0.0857695
MA0164.1号机组0.696687
MA0080.2号0.257089
马0018.20.125708
MA0099.2号机组0.357676
MA0079.2号5.43013e-07号
MA0102.2号机组0.335846
马0258.10.147417
马0259.10.160921
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


没有此群集的分析结果

共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据