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共表达簇以下为:C115号

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完整id:C115_pituitary_Neural_caudate_putamen_amygdala_medulla_himpia



第一阶段CAGE峰值

Hg19::chr10:106423509..106423521+p@chr10:106423509..106423521
+
Hg19::chr10:123959529..123959547+电话:chr10:123959529…123959547
+
Hg19::chr10:18579999..18580012-电话:chr10:18579999…18580012
-
Hg19::chr10:18580030..18580043-电话:chr10:18580030..18580043
-
Hg19::chr10:18580125..18580134+电话:chr10:18580125..18580134
+
Hg19::chr10:18580138..18580153+电话:chr10:18580138..18580153
+
Hg19::chr11:111601666..11161697-电话:chr11:111601666..111601697
-
Hg19::chr11:68419276.68419303-p@chr11:68419276..68419303
-
Hg19::chr11:9088284..9088330-p4@潜水器2
Hg19::chr12:113697781..113697814+第7页@TPCN1
Hg19::chr12:80603044..80603046+第1页@OTOGL
Hg19::chr12:89881337..89881342-电话:chr12:89881337..89881342
-
Hg19::chr12:89881348..89881356-p@chr12:89881348..89881356
-
Hg19::chr13:40924577..40924587-p2@ENST00000400432
Hg19::chr13:40924605..40924623-p1@ENST00000400432
Hg19::chr13:51617751..51617754+电话:chr13:51617751..51617754
+
Hg19::chr14:62584108..62584133+第1页@FLJ43390
Hg19::chr14:62584173..62584178+p2@ENST00000334389
Hg19::chr15:24157554..24157578+电话:chr15:24157554..24157578
+
Hg19::chr15:33445488..33445523-电话:chr15:33445488..33445523
-
Hg19::chr15:33445536.33445552-电话:chr15:33445536..3345552
-
Hg19::chr15:48681810..48681835-电话:chr15:48681810..48681835
-
Hg19::chr15:62352961..62352973-第8页@VPS13C
Hg19::chr15:89147906..89147920+电话:chr15:89147906..89147920
+
Hg19::chr16:21049173..21049231-电话:chr16:21049173..21049231
-
Hg19::chr17:18021982..18021985+第3页@MYO15A
Hg19::chr17:191188..191219-电话:chr17:191188..191219
-
Hg19::chr17:191225..191238-电话:chr17:191225..191238
-
Hg19::chr17:61995906..61995914-p6@AB591020
Hg19::chr17:61995979..61995990-第2页@AB591020
Hg19::chr17:61995995.61996002-第3页@AB591020
Hg19::chr17:61996018..61996019-p5@AB591020
Hg19::chr17:61996155..61996158-p5@GH1
Hg19::chr17:61996160..61996176-第3页@GH1
Hg19::chr17:61996252..61996253-第2页@GH1
第3页@CSHL1
Hg19::chr17:61996393..61996421-p4@CSHL1
第4页@GH1
Hg19::chr18:21824830..21824832-电话:chr18:21824830..21824832
-
Hg19::chr19:14095105..14095108-电话:chr19:14095105..14095108
-
Hg19::chr19:14946017..14946050-第3页@OR7A5
Hg19::chr19:2608406..2608413-电话:chr19:2608406..2608413
-
Hg19::chr19:46801484..46801498+p9@HIF3A
Hg19::chr19:4770772..4770775+第1页@MIR7-3
Hg19::chr19:47793168..47793181+电话:chr19:47793168..477933181
+
Hg19::chr1:109656644..109656670+第4页@KIAA1324
Hg19::chr1:114483276..114483289+电话:chr1:114483276..114483289
+
Hg19::chr1:159116850..159116858-第10页@AIM2
Hg19::chr1:159116897..159116903-第12页@AIM2
Hg19::chr1:168250110..168250120+第2页@TBX19
Hg19::chr1:168250194..168250197+第3页@TBX19
Hg19::chr1:206942410..206942414-电话:chr1:206942410..206942414
-
Hg19::chr1:240286421..240286436+p@chr1:240286421.240286436
+
Hg19::chr1:43400328..43400332+电话:chr1:43400328..43400332
+
Hg19::chr1:7709325..7709329+电话:chr1:7709325.7709329
+
Hg19::chr20:20505922..20505946-电话:chr20:20505922..20505946
-
Hg19::chr20:31667446..31667451+第1页@BPIFB4
Hg19::chr20:33451327..33451358-第4页@GGT7
Hg19::chr20:57415768..57415803+电话:chr20:57415768..57415803
+
Hg19::chr20:58401707..58401714+p@chr20:58401707..58401714
+
Hg19::chr20:58401908..58401905+电话:chr20:58401905
+
Hg19::chr22:45015998..45016005-电话:chr22:45015998..45016005
-
Hg19::chr2:13094146..130941486-p1@CU676019
Hg19::chr2:1714065..1714071+电话:chr2:1714065..1714071
+
Hg19::chr2:187287127..187287143-p@chr2:187287127..187287143
-
Hg19::chr2:2118830430..211830435+电话:chr2:211830430..211830435
+
Hg19::chr2:211830446..211830457+电话:chr2:211830446..211830457
+
Hg19::chr2:241080084..241080093-p5@OTOS
Hg19::chr2:25383828..25383855-第4页@POMC
Hg19::chr2:25383910..25383918-第17页@POMC
Hg19::chr2:25383947..25383959+电话:chr2:25383947..25383959
+
Hg19::chr2:25391399..25391417-第8页@POMC
Hg19::chr2:225391425.25391439-p10@POMC
Hg19::chr2:25391442..25391456-p1@POMC
Hg19::chr2:25391468..25391485-第5页@POMC
Hg19::chr2:25391507..25391519-第9页@POMC
Hg19::chr2:25391657..25391666-第14页@POMC
Hg19::chr2:225391815..25391821-第13页@POMC
Hg19::chr2:45161466..45161475+电话:chr2:45161466..45161475
+
Hg19::chr2:58113353..58113375-电话:chr2:58113353..58113375
-
Hg19::chr2:58113386..58113399-电话:chr2:58113386..58113399
-
Hg19::chr2:58113402..58113415-电话:chr2:58113402..58113415
-
Hg19::chr2:58113422..58113431-电话:chr2:58113422..58113431
-
Hg19::chr2:70312872..70312889-第23页@PCBP1-AS1
Hg19::chr2:70312899..70312908-p44@PCBP1-AS1
Hg19::chr2:7497646..7497649+电话:chr2:7497646..7497649
+
Hg19::chr2:98962912..98962924+第2页@CNGA3
Hg19::chr3:108321623..108321685+第4页@DZIP3
Hg19::chr3:114477881..114477914-p17@ZBTB20
Hg19::chr3:118521917..118521922-电话:chr3:118521917..118521922
-
Hg19::chr3:130248877..130248886+p@基督3:130248877..130248886
+
Hg19::chr3:130248915..130248922+电话:chr3:130248915..130248922
+
Hg19::chr3:130248948..130248959+电话:chr3:130248948..130248959
+
Hg19::chr3:133115455..133115457+电话:chr3:133115455..133115457
+
Hg19::chr3:154042775..154042780-p8@DHX36
Hg19::chr3:185324217..185324224+p1@ENST00000455173
Hg19::chr3:24206603..24206613-p17@推力
Hg19::chr3:24206934..24206942-第24页@THRB
Hg19::chr3:4774755..4774765+电话:chr3:4774755..4774765
+
Hg19::chr3:58572679..58572682-第30页@FAM107A
Hg19::chr3:58572689..58572703-第6页@FAM107A
Hg19::chr3:58572720..58572733-第11页@FAM107A
Hg19::chr3:58572734..58572746-p8@FAM107A时
Hg19::chr3:585572760..585572774-第9页@FAM107A
Hg19::chr3:79817089..79817094-第27页@ROBO1
Hg19::chr3:87325636..87325643-第2页@POU1F1
Hg19::chr3:87325728..87325739-p1@POU1F1
Hg19::chr4:108815402..108815408+第13页@SGMS2
Hg19::chr4:1352813..1352818-p@chr4:1352813..1352818
-
Hg19::chr4:6635531..6635534+电话:chr4:6635531..6635534
+
Hg19::chr4:70518941.70518967-第1页@UGT2A1
第1页@UGT2A2
Hg19::chr4:76359403..76359419-p1@ENST00000510744
Hg19::chr4:8103287..8103292+电话:chr4:8103287..8103292
+
Hg19::chr5:132668491..132668494+电话:chr5:132668491..132668494
+
Hg19::chr5:134509776..134509792+电话:chr5:134509776..134509792
+
Hg19::chr5:134509799.134509814+p@chr5:134509799..134509814
+
Hg19::chr5:158737729..158737738-电话:chr5:158737729..158737738
-
Hg19::chr5:158737824..158737862+p1@ENST00000521472
Hg19::chr5:165553564..165553568-电话:chr5:165553564..165553568
-
Hg19::chr5:77409743..77409752-p6@AP3B1
Hg19::chr6:12717892..12717903+第23页@PHACTR1
Hg19::chr6:139155017..139155049-电话:chr6:139155017..139155049
-
Hg19::chr6:163149056..163149101+第2页,位于PACRG
Hg19::chr6:168333280..168333294+第9页@MLLT4
Hg19::chr6:22287516..22287522-电话:chr6:22287516..22287522
-
Hg19::chr6:22287527..22287538-电话:chr6:22287527…22287538
-
Hg19::chr6:22287619..22287636-电话:chr6:22287619…22287636
-
Hg19::chr6:22287669..22287676-p@chr6:2287669.第22287676页
-
Hg19::chr6:2287695.第22287700页-电话:chr6:22287695..22287700
-
Hg19::chr6:22297257..22297272-p1@PRL
Hg19::chr6:82727317..82727327+电话:chr6:82727317..82727327
+
Hg19::chr6:88805080..88805083-电话:chr6:88805080..88805083
-
Hg19::chr7:103549700..103549706-电话:chr7:103549700..103549706
-
Hg19::chr7:150644605..150644616-电话:chr7:150644605..150644616
-
Hg19::chr7:31003560..31003576+第5页@GHRHR
Hg19::chr7:31003580..331003589+第6页@GHRHR
Hg19::chr7:31006649..31006651+电话:chr7:31006649..31006651
+
Hg19::chr7:31009189..31009197+第11页@GHRHR
Hg19::chr7:31010569..31010576+第9页@GHRHR
Hg19::chr7:31010582..31010601+第4页@GHRHR
Hg19::chr7:31016265.31016282+电话:chr7:31016265..31016282
+
Hg19::chr7:95114742..95114776+第4页@ASB4
Hg19::chr8:1066886..1066919+电话:chr8:1066886..1066919
+
Hg19::chr8:107844170..107844179+电话:chr8:107844170.107844179
+
Hg19::chr8:130017368..130017390+电话:chr8:130017368..130017390
+
Hg19::chr9:135964996..135965001+电话:chr9:135964996..135965001
+
Hg19::chr9:135965121..135965124+电话:chr9:135965121..135965124
+
Hg19::chr9:547212..547233+第28页@KANK1
Hg19::chr9:75568126..75568136-p13@ALDH1A1
Hg19::chr9:75568163..75568197-p8@ALDH1A1
Hg19::chrX:111923145..111923173-p1@LHFPL1
Hg19::chrX:130215591..130215605+电话:130215591..130215605
+
Hg19::chrX:130215610..130215625+电话:130215610..130215625
+
Hg19::chrX:130215640..130215656+p@chrX:130215640..130215656
+
Hg19::chrX:130423240..130423288-p1@IGSF1
Hg19::chrX:130423386..130423397-p6@IGSF1
Hg19::chrX:147887590..147887594+邮政编码:147887590..147887594
+
Hg19::chrX:150345054..150345060+p1@GPR50
Hg19::chrX:24169518..24169522+p8@ZFX
Hg19::chrX:38147077..38147085-邮政编码:38147077..38147085
-
Hg19::chrX:38183144..38183165-p@chrX:338183144..38183165
-
Hg19::chrX:9528518..9528536+电话:9528518..9528536
+


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


p.值财务总监n基因n通道姓名
2.57139298499459e-050.01627691759501575272神经活性配体-受体相互作用(KEGG):04080



此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


GO标识GO名称FDR校正的p值
GO:0050954号机械刺激的感觉0.0393796071001252
去:0007605声音的感觉0.0393796071001252
去:0005515蛋白质结合0.0393796071001252
去:0032501多细胞生物过程0.0445827919264483
电话:0048187抑制素β-B结合0.0445827919264483
去:0031593多泛素结合0.0445827919264483
去:0005179激素活性0.0445827919264483
去:0007600感觉知觉0.0445827919264483
GO:0051138号NK T细胞分化的正调控0.0445827919264483
去:0033188鞘磷脂合成酶活性0.0445827919264483
GO:0047493号神经酰胺胆碱磷酸转移酶活性0.0445827919264483
GO:0048007号抗原处理和提呈,通过MHC Ib类外源性脂质抗原0.0445827919264483
GO:0001865号NK T细胞分化0.0445827919264483
GO:0051136号NK T细胞分化的调控0.0445827919264483
GO:0048186号抑制素β-A结合0.0445827919264483
去:0005148催乳素受体结合0.0445827919264483
GO:0048856号解剖结构发育0.0445827919264483
去:0003008系统进程0.0445827919264483
去:0002475通过MHC类Ib进行抗原处理和呈递0.0445827919264483
GO:0021984年腺垂体发育0.0445827919264483
GO:0001758号视网膜脱氢酶活性0.0445827919264483
去:0008046轴突导向受体活性0.0445827919264483
去:0006686鞘磷脂生物合成过程0.0445827919264483
GO:0048003号抗原加工和通过MHC类Ib提呈脂质抗原0.0445827919264483
去:0003712转录辅因子0.0445827919264483



此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集uberon_data(超级数据)<br><br>


优步解剖
本体术语p值n个
垂体3.29e-195年2
间脑腺1.55e-98型4
神经内分泌腺1.55e-98型4
间脑4.76e-57页7
未来间脑4.76e-57页7
内分泌腺2014年2月12日35
前脑区域部分1.07e-1041
前脑1.07e-1041
前神经管1.07e-1041
未来前脑1.07e-1041
内分泌系统4.55e-1045
神经系统区域部分2008年4月13日53
大脑区域部分1.34e-08年53
神经管2008年3月28日56
神经棒2008年3月28日56
未来脊髓2008年3月28日56
神经龙骨2008年3月28日56
5.66e-08年59
弦前神经板2007年1月20日61
6.59e-0768
未来大脑6.59e-0768


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组6.56662e-07号
MA0004.1号机组0.0658703
MA0006.1号机组0.0526196
MA0007.1号机组10.2839
MA0009.1号机组0.926808
MA0014.1号0.000231996
MA0017.1号1.57643
MA0019.1号1.48048
MA0024.1号机组0.0727794
MA0025.1号文件0.929151
MA0027.1号机组1.24314
MA0028.1号机组0.00406943
MA0029.1号机组0.666569
MA0030.1型0.634367
MA0031.1号文件0.270298
电话0038.11.179
MA0040.1型0.417607
MA0041.1号0.0408253
MA0042.1号0.390637
MA0043.1号0.590008
MA0046.1号0.308427
MA0048.1号0.0033594
马0050.10.0554183
MA0051.1号0.193729
MA0052.1号0.425328
MA0055.1号0.493952
马0056.10
MA0057.1号0.266424
MA0058.1号0.0964837
MA0059.1号0.00491091
马0060.10.00318017
MA0061.1号4.4271e-05号
MA0063.1号0
MA0066.1号2.54068
MA0067.1号0.156922
MA0068.1号0.141812
马0069.10.555546
MA0070.1号0.287215
MA0071.1号0.524342
MA0072.1号0.830272
MA0073.1号2.00267e-12号
MA0074.1号0.313753
MA0076.1号9.89943e-05号
MA0077.1号0.270549
MA0078.1号0.130471
MA0081.1号0.0543416
MA0083.1号0.0363247
MA0084.1号0.271361
MA0087.1号0.822687
MA0088.1号0.0161323
马0089.10
MA0090.1号0.0893791
MA0091.1号机组4.49857
MA0092.1号0.983026
MA0093.1号0.03126
马0095.10
马0098.10
MA0100.1型0.362682
MA0101.1号机组0.0596478
MA0103.1号3.05294
MA0105.1号1.81521e-05
MA0106.1号0.0320302
MA0107.1号0.00954083
MA0108.2号4.25484
MA0109.1号0
MA0111.1号0.0301857
MA0113.1号4.14305
MA0114.1号1.06113
MA0115.1号0.118547
MA0116.1号0.445386
MA0117.1号0.168187
马0119.10.184847
MA0122.1号机组0.190324
MA0124.1号机组0.673857
MA0125.1号机组0.239005
MA0130.1号机组0
马0131.10.0211279
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组8.25193
MA0136.1号机组0.0211283
MA0139.1号0.522951
MA0140.1号机组0.135548
MA0141.1号2.12701
MA0142.1号1.96968
MA0143.1号0.317935
MA0144.1号机组0.749709
MA0145.1号0.000469326
MA0146.1号3.93146e-06号
MA0147.1号0.00567842
MA0148.1号0.540725
MA0149.1号0.0629036
MA0062.2号9.78473e-05号
MA0035.2号0.701262
MA0039.2号2012年7月2日
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马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


没有此群集的分析结果

共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据