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共表达簇以下为:113元

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完整id:C113_thydroy_throat_lung_lymph_small_colon_trachea



第一阶段CAGE峰值

Hg19::chr10:24527799..24527819+第20页@KIAA1217
Hg19::chr10:95995120..95995126+电话:chr10:95995120..95995126
+
Hg19::chr10:95995491..95995500+电话:chr10:95995491..95995500
+
Hg19::chr11:114043484..114043494-p@chr11:114043484..114043494
-
Hg19::chr11:13517531..13517550-p1@PTH
Hg19::chr11:13517565..13517580-PTH时为p2
Hg19::chr12:101603978..101603992-第2页@SLC5A8
Hg19::chr12:132850184..132850187-电话:chr12:132850184..132850187
-
Hg19::chr14:104516015..104516028+第7页@TDRD9
Hg19::chr14:104516061..104516124+电话:chr14:104516061..104516124
+
Hg19::chr14:36575014..36575016+电话:chr14:36575014..36575016
+
Hg19::chr14:36988752..36988767-p1@ENST00000521945
Hg19::chr14:36990386..36990397-p16@NKX2-1处
Hg19::chr14:36990398..36990415-p10@NKX2-1
Hg19::chr14:36990416..36990438-p4@NKX2-1
Hg19::chr14:36993892..3699312+电话:chr14:36993892..3699312
+
Hg19::chr14:81421242.81421243+第13页@TSHR
Hg19::chr14:81421428..81421431+p11在TSHR下
Hg19::chr14:81421522..81421524+第12页@TSHR
Hg19::chr14:81421861..81421875+第5页@TSHR
Hg19::chr14:81421921..81421989+p1@TSHR
Hg19::chr15:40675222..40675233+p4@C15或f23
Hg19::chr15:55806824..55806840-电话:chr15:55806824..55806840
-
Hg19::chr15:55806847..55806854-电话:chr15:55806847..55806854
-
Hg19::chr15:63908106..63908107-电话:chr15:63908106..63908107
-
Hg19::chr15:63908112..63908124-电话:chr15:63908112..63908124
-
Hg19::chr15:64235138..64235147-电话:chr15:64235138..64235147
-
Hg19::chr15:64235172..64235180-电话:chr15:64235172..64235180
-
Hg19::chr15:64235185..64235196-电话:chr15:64235185..64235196
-
Hg19::chr15:64235201..64235208-电话:chr15:64235201..64235208
-
Hg19::chr15:64421903.64421920+电话:chr15:64421903..64421920
+
Hg19::chr15:72448259..72448278+电话:chr15:72448259..72448278
+
Hg19::chr16:16103486..16103493+第19页@ABCC1
Hg19::chr16:56781652..56781694+第4页@AB385278
Hg19::chr16:56781737..56781741+第8页@AB385278
Hg19::chr16:56781814..56781829+p3@AB385278
Hg19::chr16:64451926..64451964+电话:chr16:64451926..64451964
+
Hg19::chr16:66420782..66420796+电话:chr16:66420782..66420796
+
Hg19::chr16:66420861..66420868+电话:chr16:66420861..66420868
+
Hg19::chr17:41243516..41243529-电话:chr17:41243516..41243529
-
Hg19::chr17:41243533..41243543-电话:chr17:41243533..41243543
-
Hg19::chr18:45354061..45354074+p@chr18:45354061..45354074
+
Hg19::chr18:45563449..45563457+电话:chr18:45563449..45563457
+
Hg19::chr18:458692268..45869275+电话:chr18:458692268..45869275
+
Hg19::chr18:45869281..45869293+电话:chr18:45869281..45869293
+
Hg19::chr18:47087250..47087279+第2页@LIPG
Hg19::chr18:47087304..47087313+第8页@LIPG
Hg19::chr18:47087321..47087336+第5页@LIPG
Hg19::chr18:47087361..47087374+第3页@LIPG
Hg19::chr18:53858147..53858168-p1@ENST00000382897
Hg19::chr18:77941319..77941321-p@chr18:779441319..779441321
-
Hg19::chr19:16495444..16495471-电话:chr19:16495444..16495471
-
Hg19::chr19:20068797.20068802+电话:chr19:20068797.20068802
+
Hg19::chr19:20069252..20069265+p@chr19:200692252..20069265
+
Hg19::chr19:20358361..20358398+电话:chr19:20358361.20358398
+
Hg19::chr19:20382476..20382481-p@chr19:20382476..20382481
-
Hg19::chr19:20382633..20382642-电话:chr19:20382633…20382642
-
Hg19::chr19:20386982..20386989+电话:chr19:20386982..20386989
+
Hg19::chr19:20386998..20387003+电话:chr19:20386998…20387003
+
Hg19::chr19:20387031..20387036+电话:chr19:20387031…20387036
+
Hg19::chr19:20387078..20387085+电话:chr19:20387078.20387085
+
Hg19::chr19:20468965..20468977+电话:chr19:20468965..20468977
+
Hg19::chr19:20473354..20473358+电话:chr19:20473354..20473358
+
Hg19::chr19:20473375.20473380+电话:chr19:20473375..20473380
+
Hg19::chr19:20473389..20473398+电话:chr19:20473389..20473398
+
Hg19::chr19:20473404..20473414+电话:chr19:20473404..20473414
+
Hg19::chr19:20473429..20473445+电话:chr19:20473429..20473445
+
Hg19::chr19:20473448..20473452+电话:chr19:20473448..20473452
+
Hg19::chr19:20473506.20473536+电话:chr19:20473506..20473536
+
Hg19::chr1:109720258..109720279-电话:chr1:109720258..109720279
-
Hg19::chr1:12678746..12678753-电话:chr1:12678746..12678753
-
Hg19::chr1:186316121..186316146-电话:chr1:186316121..186316146
-
Hg19::chr1:220961678..220961683+电话:chr1:220961678..220961683
+
Hg19::chr1:28261645..28261657+p4@SMPDL3B
Hg19::chr1:36771641..367711644+p11@SH3D21
Hg19::chr20:17953210..17953230+电话:chr20:17953210..17953230
+
Hg19::chr20:57452679..57452686+电话:chr20:57452679..57452686
+
Hg19::chr21:43770677..43770683+电话:chr21:43770677…43770683
+
Hg19::chr21:44440926..44440935+p8@PKNOX1
Hg19::chr21:44441244..44441257+p6@PKNOX1
Hg19::chr21:444448694..44448703+电话:chr21:444448694..44448703
+
Hg19::chr22:31522733..31522740+电话:chr22:31522733..31522740
+
Hg19::chr22:31522774..31522780+电话:chr22:31522774..31522780
+
Hg19::chr2:134788828..134788834-电话:chr2:134788828..134788834
-
Hg19::chr2:134788843..134788848-电话:chr2:134788843..134788848
-
Hg19::chr2:134788853..134788858-电话:chr2:134788853..134788858
-
Hg19::chr2:1417228..1417247+第1页@TPO
Hg19::chr2:1417430..1417444+电话:chr2:1417430..1417444
+
Hg19::chr2:1426812..1426834+TPO条件下的p5
Hg19::chr2:1426850..1426859+第10页@TPO
Hg19::chr2:1488557..1488560+第22页@TPO
Hg19::chr2:172309636..172309643+p11@DCAF17
Hg19::chr2:24551030..24551033-第16页@ITSN2
Hg19::chr2:29338034..29338054+第20页@剪辑4
Hg19::chr2:74517717..74517732-p9@SLC4A5
Hg19::chr2:85935758..85935760-电话:chr2:85935758..85935760
-
Hg19::chr2:85938623..85938632+电话:chr2:85938623..85938632
+
Hg19::chr3:164169090..164169105+电话:chr3:164169090..164169105
+
Hg19::chr3:164169110..164169124+电话:chr3:164169110..164169124
+
Hg19::chr3:193201843..193201848-电话:chr3:193201843..193201848
-
Hg19::chr3:193201889..193201922-电话:chr3:193201889..193201922
-
Hg19::chr3:193201963.193201996-p@chr3:193201963..193201996
-
Hg19::chr3:37725131..37725145+第4页@ITGA9
Hg19::chr3:9391106..9391117-电话:chr3:9391106..9391117
-
Hg19::chr3:97686432..97686471-p10@最小进气压力
Hg19::chr4:109015207..109015232-电话:chr4:109015207..109015232
-
Hg19::chr4:173916930..173916942-p1@uc003isx.1
Hg19::chr4:41131475..41131507-电话:chr4:41131475..41131507
-
Hg19::chr4:42457338..42457350-电话:chr4:42457338..42457350
-
Hg19::chr4:89658763..89658771-第42页@FAM13A
Hg19::chr4:89658773..89658782-第38页@FAM13A
Hg19::chr4:89658785..89658794-第41页@FAM13A
Hg19::chr5:125798031..125798049+第27页@GRAMD3
Hg19::chr5:156399340..156399369-电话:chr5:156399340..156399369
-
Hg19::chr5:90151468..90151479+电话:chr5:90151468.90151479
+
Hg19::chr5:90151510..90151524+电话:chr5:90151510..90151524
+
Hg19::chr5:90151536..90151543+电话:chr5:90151536.90151543
+
Hg19::chr5:90151567..90151577+p@chr5:90151567..90151577
+
Hg19::chr6:150690053..150690058+第一年第三页
Hg19::chr6:150690140..150690175+IYD时的p1
Hg19::chr6:150719834..150719836+电话:chr6:150719834..150719836
+
Hg19::chr6:152746723..152746726-电话:chr6:152746723..152746726
-
Hg19::chr6:152746788..152746797-电话:chr6:152746788..152746797
-
Hg19::chr6:152749469..152749476-电话:chr6:152749469..152749476
-
Hg19::chr6:43837195..43837213-电话:chr6:43837195..43837213
-
Hg19::chr6:43837226..43837237-电话:chr6:43837226..43837237
-
Hg19::chr6:46996835..46996871-p6@探地雷达110
Hg19::chr7:107301045..107301057+p9@SLC26A4
Hg19::chr7:107301065..107301076+第8页@SLC26A4
Hg19::chr7:107301236..107301244+p10@SLC26A4
Hg19::chr7:107301340..107301345+p13@SLC26A4
Hg19::chr7:107301406..107301418+第5页@SLC26A4
Hg19::chr7:107301420..107301434+第7页@SLC26A4
Hg19::chr7:107301447..107301451+第23页@SLC26A4
Hg19::chr7:107301483..107301492+第14页@SLC26A4
Hg19::chr7:107301517..107301529+p12@SLC26A4
Hg19::chr7:107302560..107302575-p2@ENST00000449741
Hg19::chr7:107302587..107302611-p1@ENST00000449741
Hg19::chr7:107303668..107303680+电话:chr7:107303668..107303680
+
Hg19::chr7:107678217..107678226-p3@灯4
Hg19::chr7:116093470..116093490-电话:chr7:116093470..116093490
-
Hg19::chr7:48284041..48284057+电话:chr7:48284041..48284057
+
Hg19::chr7:48284075..48284080+电话:chr7:48284075..48284080
+
Hg19::chr7:48284886..48284925+电话:chr7:48284886..48284925
+
Hg19::chr7:88388567..88388605+p5@ZNF804B
Hg19::chr7:88388628..88388669+p6@ZNF804B
Hg19::chr7:88389004..88389019+p1@ZNF804B
Hg19::chr7:90675197..90675213+电话:chr7:90675197..90675213
+
Hg19::chr8:110374683..110374759+p1@PKHD1L1
Hg19::chr8:133899297..133899305-电话:chr8:133899297..133899305
-
Hg19::chr8:133900307..133900325-电话:chr8:133900307..133900325
-
Hg19::chr8:134147075..134147104+电话:chr8:134147075..134147104
+
Hg19::chr8:29177729..29177743-电话:chr8:29177729..29177743
-
Hg19::chr8:29177800..29177807-电话:chr8:29177800..29177807
-
Hg19::chr8:29177815..29177822-电话:chr8:29177815..29177822
-
Hg19::chr8:29177832..29177841-p@chr8:29177832.29177841
-
Hg19::chr8:48610431..48610439+第24页@KIAA0146
Hg19::chr9:100614368..100614372+电话:chr9:100614368..100614372
+
Hg19::chr9:100615296..100615313-电话:chr9:100615296..100615313
-
Hg19::chr9:100615546..100615558+p4@福克斯1
Hg19::chr9:100616714..100616732+电话:chr9:100616714..100616732
+
Hg19::chr9:130404639..130404649+电话:chr9:130404639..130404649
+
Hg19::chr9:130404725..130404737+电话:chr9:130404725..130404737
+
Hg19::chr9:3898653..3898681+第1页@GLIS3-AS1
Hg19::chrX:43587398..43587403+p@chrX:43587398.43587403
+


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


GO标识GO名称FDR校正的p值
去:0030878甲状腺发育0.00244326503363639
去:0006590甲状腺激素生成0.00244326503363639
GO:0042403编号甲状腺激素代谢过程0.00298269866463447
GO:0015108号氯离子跨膜转运活性0.0141994706185855
去:0035270内分泌系统发育0.0141994706185855
GO:0048732号腺体发育0.0230772003905823
电话:0031856甲状旁腺激素受体结合0.027514158822059
GO:0060022号硬腭发育0.027514158822059
转到:0015103无机阴离子跨膜转运活性0.027514158822059
去:0006576生物胺代谢过程0.027514158822059
去:0004996甲状腺刺激激素受体活性0.027514158822059
GO:0015111号碘跨膜转运蛋白活性0.027514158822059
GO:0060023号软腭发育0.027514158822059
去:0004447碘过氧化物酶活性0.027514158822059
GO:0021798号前脑背侧/腹侧模式形成0.027514158822059
去:0008970磷脂酶A1活性0.027514158822059
GO:0042445号激素代谢过程0.029257394218803
去:0006575氨基酸衍生物代谢过程0.029257394218803
去:0035081激素诱导程序性细胞死亡0.0314350345810171
GO:0008628号激素诱导细胞凋亡0.0314350345810171
GO:0060021号腭发育0.0314350345810171
去:0006357RNA聚合酶II启动子转录调控0.0367889686043127
GO:0021871号前脑区域化0.0367889686043127
去:0007187G蛋白信号,与环核苷酸第二信使偶联0.0367889686043127
GO:0019935号环核苷酸介导的信号转导0.0383389715790313
GO:0048522号细胞过程的正调控0.0394759063720948
转到:0004465脂蛋白脂肪酶活性0.0488536259329727



此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集uberon_data(超级数据)<br><br>


优步解剖
本体术语p值n个
喉咙4.22e-98年2
甲状腺1.81e-40英寸5
咽囊1.81e-405
甲状腺憩室1.81e-405
咽袋21.81e-405
甲状腺原基1.81e-405
脖子1.04e-2010
全咽弓内胚层4.28e-1911
早期咽内胚层4.28e-1911
咽弓系统4.07e-12日18
内分泌腺9.98e-07年35


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组1.35814e-10号
MA0004.1号机组0.106217
MA0006.1号机组0.0050523
MA0007.1号机组2.42683
MA0009.1号机组0.129499
MA0014.1号1.08231e-05号
MA0017.1号0.846137
MA0019.1号0.151702
MA0024.1号机组0.066695
MA0025.1号文件0.523159
MA0027.1号机组1.23018
MA0028.1号机组0.0171532
MA0029.1号机组0.076431
MA0030.1型0.600695
MA0031.1号文件1.68849
电话0038.10.85492
MA0040.1型0.0795419
MA0041.1号5.05366
MA0042.1号2.84633
MA0043.1号0.031882
MA0046.1号1.23244
MA0048.1号0.00375805
马0050.10.0473926
MA0051.1号0.28795
MA0052.1号0.401003
MA0055.1号0.0275204
马0056.10
MA0057.1号0.17001
MA0058.1号0.0821875
MA0059.1号0.0804928
马0060.12.40561e-06号
MA0061.1号0.798671
MA0063.1号0
MA0066.1号0.636897
MA0067.1号0.457967
MA0068.1号0.0820161
马0069.13.24115
MA0070.1号0.111665
MA0071.1号1.6929
MA0072.1号0.493666
MA0073.1号0
MA0074.1号0.614345
MA0076.1号0.00184071
MA0077.1号0.768814
MA0078.1号0.0501194
MA0081.1号0.68
MA0083.1号0.0334619
MA0084.1号0.26253
MA0087.1号0.488438
MA0088.1号0.00163538
马0089.10
MA0090.1号3.48347
MA0091.1号机组2.0308
MA0092.1号0.546226
MA0093.1号0.121251
马0095.10
马0098.10
MA0100.1型0.0199042
MA0101.1号机组1.76074
MA0103.1号1.54888
MA0105.1号0.383456
MA0106.1号0.257547
MA0107.1号1.18792
MA0108.2号1.29065
MA0109.1号0
MA0111.1号1.46296
MA0113.1号3.04417
MA0114.1号0.191558
MA0115.1号0.112623
MA0116.1号0.0754026
MA0117.1号0.0406109
马0119.11.31785
MA0122.1号机组2.05986
MA0124.1号机组1.59458
MA0125.1号机组0.846219
MA0130.1号机组0
马0131.10.137383
MA0132.1号机组0
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马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


(#promoters=该共表达簇中具有TF的ChIP信号的启动子数量)

TF公司#发起人丰富p值q值
苏Z12#2351292.733588049694340.006200522007882640.0273978811127625



共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据