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共表达簇以下为:102元

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完整id:C102_神经母细胞瘤_testicular_puitary_carninosarcoma_rectum_ancantholytic_iPS



第一阶段CAGE峰值

Hg19::chr10:127350469..127350475-电话:chr10:127350469..127350475
-
Hg19::chr10:127350497..127350505-电话:chr10:127350497..127350505
-
Hg19::chr11:133821367..133821390-电话:chr11:133821367..133821390
-
Hg19::chr11:68450506..68450518+电话:chr11:68450506..68450518
+
Hg19::chr11:68451165..68451175+p4@镀锌
Hg19::chr11:68451232..68451268+p5@镀锌
Hg19::chr11:68452002..68452019+p1@加仑
Hg19::chr11:71952309..71952319-p2@电话2A
Hg19::chr11:71955016..71955024-p7@电话2A
Hg19::chr12:122711996..122712008-第5页@DIABLO
Hg19::chr12:122712038..122712049-p8@直径
Hg19::chr12:49688923..49688936+p1@PRPH
Hg19::chr14:104690772..104690782+电话:chr14:104690772..104690782
+
Hg19::chr14:104760121..104760131+电话:chr14:104760121..104760131
+
Hg19::chr14:104760198..104760243+电话:chr14:104760198..104760243
+
Hg19::chr14:104760559..104760564+电话:chr14:104760559..104760564
+
Hg19::chr14:104760576..104760581+电话:chr14:104760576..104760581
+
Hg19::chr14:104760588..104760595+电话:chr14:104760588..104760595
+
Hg19::chr14:104760605..104760614+电话:chr14:104760605..104760614
+
Hg19::chr15:74495513..74495544-第8页@STRA6
Hg19::chr16:57980377..57980387-电话:chr16:57980377..57980387
-
Hg19::chr16:57980404.57980415-电话:chr16:57980404..57980415
-
Hg19::chr16:57980416..57980425-电话:chr16:57980416..57980425
-
Hg19::chr16:57980435..57980443-电话:chr16:57980435..57980443
-
Hg19::chr16:57980444..57980463-电话:chr16:57980444..57980463
-
Hg19::chr17:42101631..42101637-电话:chr17:42101631..42101637
-
Hg19::chr17:74540218..74540227+p12@PRCD
Hg19::chr17:74540293..74540300+p15@PRCD
Hg19::chr19:4279647..4279659+第9页@SHD
Hg19::chr19:4279661..4279707+第3页@SHD
Hg19::chr19:488763376..48876383+电话:chr19:48876383
+
Hg19::chr19:488763384..488766391+电话:chr19:48876391
+
Hg19::chr19:488764418..48876427+电话:chr19:48876418..48876427
+
Hg19::chr19:488765547..48876593+电话:chr19:48876547..48876593
+
Hg19::chr19:488766664..488766672+电话:chr19:488766664..488766672
+
Hg19::chr19:488766673..4887694+电话:chr19:488766673..48876694
+
Hg19::chr19:48876699..48876707+电话:chr19:48876699..48876707
+
Hg19::chr19:488767709..48876718+p@chr19:48876709..48876718
+
Hg19::chr1:151688655..151688667-第14页@CELF3
Hg19::chr1:151688674..151688683-第22页@CELF3
Hg19::chr1:156626643..156626652+第14页@BCAN
Hg19::chr1:205325698..205325721-p5@KLHDC8A
Hg19::chr1:207915129..207915176+电话:chr1:207915129..207915176
+
Hg19::chr1:235813246..235813266-第7页@GNG4
Hg19::chr1:245751682..245751686-电话:chr1:245751682..245751686
-
Hg19::chr1:50569575..50569586+第11页@ELAVL4
Hg19::chr21:46690262..46690294-POFUT2条件下的p7
Hg19::chr22:48962342..48962367-p@chr22:48962342..48962367
-
Hg19::chr2:16040301..16040302-电话:chr2:16040301..16040302
-
Hg19::chr2:16081362..16081379-第4页@MYCNOS
Hg19::chr2:2069191929.20691932-电话:chr2:20691929..20691932
-
Hg19::chr2:20691964..20691969-电话:chr2:20691964..20691969
-
Hg19::chr2:27651478..27651507+p1@NRBP1
Hg19::chr2:27651519..27651539+第2页@NRBP1
Hg19::chr2:27712583..27712688-第1页@IFT172
Hg19::chr2:27805866..27805879+p2@ZNF512
Hg19::chr2:27805880..27805967+p1@ZNF512
Hg19::chr2:27805971..27805981+p3@ZNF512
Hg19::chr2:27851885..27851930+p1@GPN1
Hg19::chr2:27884081..27884103+电话:chr2:27884081..27884103
+
Hg19::chr2:27886228.第27886239页-第6页@SUPT7L
Hg19::chr2:27886258..27886282-第3页@SUPT7L
Hg19::chr2:27886408..27886419-第4页@SUPT7L
Hg19::chr2:27886420..27886431-第7页@SUPT7L
Hg19::chr2:27886432..27886452-第2页@SUPT7L
Hg19::chr2:27886460..27886511-第1页@SUPT7L
Hg19::chr2:27886747..27886783+p1@SLC4A1AP
Hg19::chr2:27938593..27938615-p1@ENST00000379677
p1@uc002rll.1页
Hg19::chr2:27994567..27994641+p1@MRPL33
Hg19::chr2:28113583..28113684+p1@英国
Hg19::chr2:29439699..29439702-电话:chr2:29439699..29439702
-
Hg19::chr2:29439775..29439786-p@chr2:29439775..29439786
-
Hg19::chr2:29439892..29439900-p@克:29439892..29439900
-
Hg19::chr2:29439948..29439958-电话:chr2:29439948..29439958
-
Hg19::chr2:29439959..29439970-电话:chr2:29439959..29439970
-
Hg19::chr2:229440063.29440070-电话:chr2:29440063..29440070
-
Hg19::chr2:29440093..29440103-电话:chr2:29440093..29440103
-
Hg19::chr2:29440116..29440123-电话:chr2:29440116..29440123
-
Hg19::chr2:29440133..29440140-电话:chr2:29440133..29440140
-
Hg19::chr2:29440175..29440180-电话:chr2:29440175..29440180
-
Hg19::chr2:29440253..29440264-电话:chr2:29440253..29440264
-
Hg19::chr2:29440474..29440512-电话:chr2:29440474..29440512
-
Hg19::chr2:29450467..29450495-电话:chr2:29450467..29450495
-
Hg19::chr2:29484252..29484254-电话:chr2:29484252..29484254
-
Hg19::chr2:29519868.29519887-电话:chr2:29519868…29519887
-
Hg19::chr2:29576587..29576590-电话:chr2:29576587…29576590
-
Hg19::chr2:29626570..29626576-电话:chr2:29626570..29626576
-
Hg19::chr2:29645795..29645797+电话:chr2:29645795..29645797
+
Hg19::chr2:29650381..29650398-电话:chr2:29650381..29650398
-
Hg19::chr2:29653880..29653881+电话:chr2:29653880..29653881
+
Hg19::chr2:29655619..29655623+电话:chr2:29655619..29655623
+
Hg19::chr2:29658492..29658495-电话:chr2:29658492..29658495
-
Hg19::chr2:29703653..29703657-电话:chr2:29703653..29703657
-
Hg19::chr2:29706034..29706038-电话:chr2:29706034..29706038
-
Hg19::chr2:29727599..29727607-电话:chr2:29727599..29727607
-
Hg19::chr2:29728669..29728672-电话:chr2:29728669..29728672
-
Hg19::chr2:29731597..29731601-电话:chr2:29731597..29731601
-
Hg19::chr2:29747873..29747882-电话:chr2:29747873…29747882
-
Hg19::chr2:29747891..29747899-电话:chr2:29747891…29747899
-
Hg19::chr2:29747901..29747910-电话:chr2:29747901..29747910
-
Hg19::chr2:29747945..29747955-p@基督:29747945..29747955
-
Hg19::chr2:29747987..29747993-电话:chr2:29747987…29747993
-
Hg19::chr2:29748214..29748225-电话:chr2:29748214..29748225
-
Hg19::chr2:29796921..29796922-电话:chr2:29796921…29796922
-
Hg19::chr2:29822049..29822052-电话:chr2:29822049..29822052
-
Hg19::chr2:29836771..29836815-电话:chr2:29836771..29836815
-
Hg19::chr2:29863817..29863820-电话:chr2:29863817…29863820
-
Hg19::chr2:29891260..29891294-电话:chr2:29891260..29891294
-
Hg19::chr2:29892736..29892737-电话:chr2:29892736..29892737
-
Hg19::chr2:29894070..29894081-p@克莱斯勒:29894070..29894081
-
Hg19::chr2:29894082..29894092-p@chr2:229894082..29894092
-
Hg19::chr2:29902123..29902129-电话:chr2:29902123..29902129
-
Hg19::chr2:29902520..29902529-电话:chr2:29902520..29902529
-
Hg19::chr2:29202609..29202616-电话:chr2:29902609..29902616
-
Hg19::chr2:30106068..30106073-电话:chr2:30106068..30106073
-
Hg19::chr2:30106093..30106097-电话:chr2:30106093..30106097
-
Hg19::chr2:30106158..30106162-电话:chr2:30106158..30106162
-
Hg19::chr2:30128567..30128583-电话:chr2:30128567..30128583
-
Hg19::chr2:30130900..30130921-电话:chr2:30130900..30130921
-
Hg19::chr2:30132841..30132846-电话:chr2:30132841..30132846
-
Hg19::chr2:30133779..30133783-电话:chr2:30133779..30133783
-
Hg19::chr2:30142997..30143009-电话:chr2:30142997.30143009
-
Hg19::chr2:3014103..30143109-第22页@ALK
Hg19::克:30143599.30143606-p15@确认
Hg19::chr2:30143685..30143694-p11@确认
Hg19::chr2:30143749..30143756-第16页@ALK
Hg19::chr2:30143760..30143777-第5页@ALK
Hg19::chr2:30143805..30143814-第6页@ALK
Hg19::chr2:30143819..30143830-第8页@ALK
Hg19::chr2:30143841..30143861-第4页@ALK
Hg19::chr2:30144040..30144047-第19页@ALK
Hg19::chr2:30144102..30144111-第9页@ALK
Hg19::chr2:30144125..30144135-第12页@ALK
Hg19::chr2:30144214..30144224-第14页@ALK
Hg19::chr2:30144229..30144240-p10@确认
Hg19::chr2:30144445..30144457-p1@确认
Hg19::chr2:30144471..30144482-第2页@ALK
Hg19::chr2:30670077..30670125+p1@LCLAT1
Hg19::chr2:30670127..30670186+p2@LCLAT1
Hg19::chr2:30670193..30670200+p5@LCLAT1
Hg19::chr2:30670209..30670220+p4@LCLAT1
Hg19::chr2:30762138..30762142+电话:chr2:30762138..30762142
+
Hg19::chr2:30863199..30863211+电话:chr2:30863199..30863211
+
Hg19::chr2:30863696..30863716+电话:chr2:30863696..30863716
+
Hg19::chr2:30864128..30864141+第8页@LCLAT1
Hg19::chr2:30864391..30864426+p6@LCLAT1
Hg19::chr2:30864461..30864472+p11@LCLAT1
Hg19::chr2:30864778..30864794+p@chr2:30864778..30864794
+
Hg19::chr2:30864827..30864835+p@基督:30864827..30864835
+
Hg19::chr2:30864920..30864931+电话:chr2:30864920..30864931
+
Hg19::chr2:30865194..30865203+第9页@LCLAT1
Hg19::chr2:30865283.30865293+p3@LCLAT1
Hg19::chr2:30865408..30865436+第7页@LCLAT1
Hg19::chr3:132975822..132975848-电话:chr3:132975822..132975848
-
Hg19::chr3:132975886..132975894-p1@ENST00000504993
Hg19::chr3:28617116..28617136+电话:chr3:28617116..28617136
+
Hg19::chr3:33998836..33998839+电话:chr3:33998836..33998839
+
Hg19::chr3:97448267..97448299-电话:chr3:97448267..97448299
-
Hg19::chr3:97455832..97455841-电话:chr3:97455832..97455841
-
Hg19::chr3:97483572..97483644+第1页@ARL6
Hg19::chr3:97483652.97483663+第4页@ARL6
Hg19::chr3:97483675..97483686+第5页@ARL6
Hg19::chr4:10057464..10057469+电话:chr4:10057464..10057469
+
Hg19::chr4:175204955..175204970+第9页@CEP44
Hg19::chr4:42400017..42400037+第4页@SHISA3
Hg19::chr4:48485147..48485178+p6@SLC10A4
Hg19::chr5:16180622..16180633-电话:chr5:16180622..16180633
-
Hg19::chr5:16180836..16180838-p6@3月11日
Hg19::chr5:16180906..16180918-p3@3月11日
Hg19::chr5:16180927..16180934-p7@3月11日
Hg19::chr5:168272120..168272136-第12页@滑道3
Hg19::chr5:168310338..168310348-电话:chr5:168310338..168310348
-
Hg19::chr5:168310353..168310356-电话:chr5:168310353..168310356
-
Hg19::chr5:168310490..168310493-电话:chr5:168310490..168310493
-
Hg19::chr5:168310509..168310521-电话:chr5:168310509..168310521
-
Hg19::chr5:168310523..168310542-电话:chr5:168310523..168310542
-
Hg19::chr6:119524135..119524144+p@基督6:119524135.119524144
+
Hg19::chr6:119524165..119524187+电话:chr6:119524165..119524187
+
Hg19::chr6:123318989..123318999+电话:chr6:123318989…123318999
+
Hg19::chr6:159190463..159190467-电话:chr6:159190463..159190467
-
Hg19::chr6:44238930..44238942+第4页@TMEM151B
Hg19::chr6:44355325..44355340+p4@CDC5L
Hg19::chr6:44355992..44356000+电话:chr6:44355992..44356000
+
Hg19::chr6:44356761..44356774+电话:chr6:44356761..44356774
+
Hg19::chr9:94955376..94955381+电话:chr9:94955376..94955381
+
Hg19::chr9:97372339..97372361-p@chr9:97372339..97372361
-
Hg19::chrX:133847905..133847915-p@chrX:133847905..133847915
-
Hg19::chrX:133847967..133848002-电话:133847967..133848002
-


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


无GOStat结果

此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集单元格_数据<br>uberon_data(超级数据)<br>疾病数据<br>


单元格类型
本体术语p值n个
迁移神经嵴细胞1.77e-10页41
新直肠真皮细胞9.44e-0859
优步解剖
本体术语p值n个
交感神经系统3.49e-79页5
自主神经系统3.49e-79页5
周围神经系统9.75e-45页8
疾病
本体术语p值n个
神经内分泌肿瘤2.83e-66页6
神经外胚层肿瘤2.00e-40岁10
生殖细胞与胚胎癌3.41e-19页22
生殖细胞癌3.41e-19页22


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组0.00204315
MA0004.1号机组0.101704
MA0006.1号机组0.429173
MA0007.1号机组0.20467
MA0009.1号机组0.235676
MA0014.1号9.76776e-05号
MA0017.1号0.321344
MA0019.1号0.438045
MA0024.1号机组0.259113
MA0025.1号文件0.0521117
MA0027.1号机组1.17532
MA0028.1号机组1.34809
MA0029.1号机组0.0521295
MA0030.1型0.467851
MA0031.1号文件0.179359
电话0038.10.62341
MA0040.1型0.148031
MA0041.1号0.206246
MA0042.1号0.0844599
MA0043.1号0.236067
MA0046.1号0.0885381
MA0048.1号0.630295
马0050.10.220061
MA0051.1号0.0542051
MA0052.1号0.0561965
MA0055.1号0.294162
马0056.10
MA0057.1号0.0257468
MA0058.1号0.0665058
MA0059.1号0.0190658
马0060.10.000899143
MA0061.1号0.00205411
MA0063.1号0
MA0066.1号0.30783
MA0067.1号0.777313
MA0068.1号3.12775
马0069.10.0863589
MA0070.1号0.967929
MA0071.1号0.826299
MA0072.1号0.199545
MA0073.1号31.3155
MA0074.1号0.293737
MA0076.1号1.01397
MA0077.1号0.372845
MA0078.1号0.839285
MA0081.1号0.161888
MA0083.1号0.0993893
MA0084.1号0.22645
MA0087.1号0.19678
MA0088.1号0.370116
马0089.10
MA0090.1号0.109752
MA0091.1号机组0.260514
MA0092.1号0.476684
MA0093.1号0.0870289
马0095.10
马0098.10
MA0100.1型1.42915
MA0101.1号机组0.198296
MA0103.1号0.103798
MA0105.1号0.00307513
MA0106.1号0.0913046
MA0107.1号0.0251477
MA0108.2号0.31961
MA0109.1号0
MA0111.1号0.293008
MA0113.1号0.672891
MA0114.1号0.22565
MA0115.1号0.0893407
MA0116.1号0.924542
MA0117.1号0.0286058
马0119.11.74363
MA0122.1号机组0.136997
MA0124.1号机组0.256241
MA0125.1号机组0.400469
MA0130.1号机组0
马0131.10.177189
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组0.113906
MA0136.1号机组0.121243
MA0139.1号0.577272
MA0140.1号机组0.0689712
MA0141.1号0.855462
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MA0148.1号1.49505
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MA0062.2号0.194778
MA0035.2号0.0324658
MA0039.2号0.214056
MA0138.2号机组0.268763
MA0002.2号机组0.578479
马0137.20.182314
MA0104.2号0.00379738
MA0047.2号1.25472
MA0112.2号0.0634616
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MA0153.1号机组0.0425567
MA0154.1号机组1.26232
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马0018.20.0152267
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MA0079.2号0.00089759
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马0258.10.0440901
马0259.10.00315782
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


(#promoters=该共表达簇中具有TF的ChIP信号的启动子数量)

TF公司#发起人丰富p值q值
传真:48A#55578530.72257313829797.4512886397291e-07号3.29887731099816e-05
GATA2#2624342.304934462451254.14202266864013e-06号0.000131445975536344
POU5F1#546058.921255357763450.0002739619540582970.00292141234632372
休息区#5978351.796547899279150.0004627111215062470.0042622232156457
WRNIP1编号5689763.504892479235410.007894123635689410.0324065240512467
锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌锌56.367372671149820.001242005297878770.00835246563458857



共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据