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共表达簇以下为:C101号机组

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完整id:C101_small_cerebellum_maxillary_colon_parietal_apididymis_merkel



第一阶段CAGE峰值

Hg19::chr11:1671395..1671423-电话:chr11:1671395..1671423
-
Hg19::chr11:2291849..2291858-第4页@ASCL2
Hg19::chr11:2292201..2292212-第3页@ASCL2
Hg19::chr11:2292226..292270-p1@ASCL2
Hg19::chr11:32635079..32635088-电话:chr11:32635079..32635088
-
Hg19::chr11:32635094..32635099-电话:chr11:32635094..32635099
-
Hg19::chr11:32635116..32635125-电话:chr11:32635116..32635125
-
Hg19::chr11:32635130..32635137-电话:chr11:32635130..32635137
-
Hg19::chr11:326351446.第32635151页-电话:chr11:32635146..32635151
-
Hg19::chr11:33826559..33826594+电话:chr11:33826559..33826594
+
Hg19::chr11:61976154..61976157+第2页@SCGB2A1
Hg19::chr11:62009653..62009664+第4页@SCGB1D2
Hg19::chr11:62009732..62009752+第3页@SCGB1D2
Hg19::chr11:62009756..62009783+p1@SCGB1D2
Hg19::chr11:90181744..90181756+电话:chr11:90181744..90181756
+
Hg19::chr11:95746788..95746792+电话:chr11:95746788..95746792
+
Hg19::chr12:2693428..2693469+电话:chr12:2693428..2693469
+
Hg19::chr12:31272124..31272129-第3页@uc001rjy.2
Hg19::chr13:24232177..24232184-电话:chr13:24232177..24232184
-
Hg19::chr13:24289097..24289102-p@chr13:24289097..24289102
-
Hg19::chr13:39261206..39261220+第1页@FREM2
Hg19::chr13:39332751..39332761+电话:chr13:39332751..39332761
+
Hg19::chr15:23810119..23810126+第3页@MKRN3
Hg19::chr15:23827035..23827038+电话:chr15:23827035..23827038
+
Hg19::chr15:32270259..32270270+电话:chr15:32270259..32270270
+
Hg19::chr15:67649588..67649598+第8页@IQCH
Hg19::chr16:50420325..50420329+电话:chr16:50420325..50420329
+
Hg19::chr16:50583403..50583421+电话:chr16:50583403..50583421
+
Hg19::chr16:50586808..50586853+p@chr16:50586808..50586853
+
Hg19::chr16:50594555..50594558+电话:chr16:50594555..50594558
+
Hg19::chr16:50609021..50609023+电话:chr16:50609021..50609023
+
Hg19::chr16:50655573..50655586-电话:chr16:50655573..50655586
-
Hg19::chr16:50659419..50659431+电话:chr16:50659419..50659431
+
Hg19::chr16:50664175..50664188+p@chr16:50664175..50664188
+
Hg19::chr16:50664743..50664753+电话:chr16:50664743..50664753
+
Hg19::chr16:50666194..50666212+电话:chr16:50666194..50666212
+
Hg19::chr16:50666256..50666270+电话:chr16:50666256..50666270
+
Hg19::chr16:50667519..50667529+电话:chr16:50667519..50667529
+
Hg19::chr16:50667622..50667641+电话:chr16:50667622..50667641
+
Hg19::chr16:50667686..50667701-电话:chr16:50667686..50667701
-
Hg19::chr16:50680042..50680056+电话:chr16:50680042..50680056
+
Hg19::chr17:37764898.37764905-电话:chr17:37764898..37764905
-
Hg19::chr17:47946107..47946118+电话:chr17:47946107..47946118
+
Hg19::chr18:10456027..10456060-电话:chr18:10456027..10456060
-
Hg19::chr18:10456176..10456181-电话:chr18:10456176..10456181
-
Hg19::chr18:10456186..10456191-电话:chr18:10456186..10456191
-
Hg19::chr18:10456221.第10456228页-电话:chr18:10456221..10456228
-
Hg19::chr18:10525925..10525936+第7页@NAPG
Hg19::chr18:3459683..3459693+电话:chr18:3459683..3459693
+
Hg19::chr18:35250402..35250410+电话:chr18:35250402..35250410
+
Hg19::chr18:36955178..36955187-电话:chr18:36955178..36955187
-
Hg19::chr18:52989415..52989429-第63页@TCF4
Hg19::chr18:53165290..53165321-电话:chr18:53165290..53165321
-
Hg19::chr18:72611750..72611755+电话:chr18:72611750..72611755
+
Hg19::chr18:72611763..72611770+电话:chr18:72611763..72611770
+
Hg19::chr19:13974949..13974960+电话:chr19:13974949…13974960
+
Hg19::chr19:18060992..180609999+电话:chr19:18060992..180609999
+
Hg19::chr19:18061245..18061251+p@chr19:18061245..18061251
+
Hg19::chr19:18061742..18061752-电话:chr19:18061742..18061752
-
Hg19::chr19:30433219..30433233+p3@URI1
Hg19::chr19:30495196..30495205+电话:chr19:30495196..30495205
+
Hg19::chr19:30495593..30495598+电话:chr19:30495593..30495598
+
Hg19::chr19:42637515..42637525+电话:chr19:42637515..42637525
+
Hg19::chr19:50832943..50832951+p9@NR1H2
Hg19::chr19:54385244..54385256-电话:chr19:54385244..54385256
-
Hg19::chr1:156828879..156828914-第1页@INSRR
Hg19::chr1:156830458..156830475-p@chr1:156830458..156830475
-
Hg19::chr1:183486836..183486856+电话:chr1:183486836..183486856
+
Hg19::chr1:183486863..183486872+电话:chr1:183486863.183486872
+
Hg19::chr1:183486877..183486880+电话:chr1:183486877..183486880
+
Hg19::chr1:216798763..216798766-电话:chr1:216798763..216798766
-
Hg19::chr1:216799658..216799665-p@chr1:216799658..216799665
-
Hg19::chr1:230889639..230889650+电话:chr1:230889639..230889650
+
Hg19::chr1:81910488..81910495+电话:chr1:81910488..81910495
+
Hg19::chr20:2397889..2397925+电话:chr20:2397889..2397925
+
Hg19::chr20:33539679..33539680-第7页@GSS
Hg19::chr20:33539681..33539688-第5页@GSS
Hg19::chr20:44664535..44664572-电话:chr20:44664535..44664572
-
Hg19::chr20:57562489..57562529+p10@TH1L
Hg19::chr20:5903677.5903685+电话:chr20:5903677..5903685
+
Hg19::chr20:5903794..5903803-电话:chr20:5903794..5903803
-
Hg19::chr2:130067563..130067579-电话:chr2:130067563..130067579
-
Hg19::chr2:130067584..130067595-电话:chr2:130067584..130067595
-
Hg19::chr2:130067633..130067649-电话:chr2:130067633..130067649
-
Hg19::chr2:130067654..130067664-电话:chr2:130067654..130067664
-
Hg19::chr2:130076372..130076376-电话:chr2:130076372..130076376
-
Hg19::chr2:165698803..165698810-第22页@COBLL1
Hg19::chr2:166522142..166522151+电话:chr2:166522142..166522151
+
Hg19::chr2:172967017..172967029-第8页@DLX2
Hg19::chr2:172967225..172967232-第7页@DLX2
Hg19::chr2:172967242..172967265-第2页@DLX2
Hg19::chr2:172967266..172967271-第6页@DLX2
Hg19::chr2:172967276..172967296-第3页@DLX2
Hg19::chr2:172967323..172967336-第4页@DLX2
Hg19::chr2:172967353..172967365-p5@DLX2
Hg19::chr2:175198519..175198542-p@chr2:175198519..175198542
-
Hg19::chr2:183381027..183381046-电话:chr2:183381027..183381046
-
Hg19::chr2:183381629..183381645-电话:chr2:183381629..183381645
-
Hg19::chr2:200298219..200298241-电话:chr2:200298219..200298241
-
Hg19::chr2:37126075..37126076-电话:chr2:37126075..37126076
-
Hg19::chr2:51259507..51259525-第22页@NRXN1
Hg19::chr2:51259528..51259554-p10@NRXN1
Hg19::chr3:65583115..65583144-电话:chr3:65583115..65583144
-
Hg19::chr3:80727046..80727051-电话:chr3:80727046..80727051
-
Hg19::chr4:107157608..107157617-p@chr4:107157608.第107157617页
-
Hg19::chr4:107158685..107158699-电话:chr4:107158685..107158699
-
Hg19::chr5:2334898..2334930-电话:chr5:2334898..2334930
-
Hg19::chr5:33986219..33986229-电话:chr5:33986219..33986229
-
Hg19::第5章第3988502节。第33988531节-电话:chr5:33988502..33988531
-
Hg19::chr6:101902072..101902081-p@chr6:101902072..101902081
-
Hg19::chr6:102074293..102074306+电话:chr6:102074293..102074306
+
Hg19::chr6:102074319..102074330+电话:chr6:102074319..102074330
+
Hg19::chr6:102074343..102074363+电话:chr6:102074343..102074363
+
Hg19::chr6:102074381..102074390+电话:chr6:102074381..102074390
+
Hg19::chr6:102074407..102074425+电话:chr6:102074407..102074425
+
Hg19::chr6:102074434..102074437+电话:chr6:102074434..102074437
+
Hg19::chr6:120555693..120555708+电话:chr6:120555693..120555708
+
Hg19::chr6:131967608..131967633+电话:chr6:131967608..131967633
+
Hg19::chr6:43858663..43858693+第4页@LOC100132354
Hg19::chr6:43858741..43858765+第2页@LOC100132354
Hg19::chr6:43858766..43858801+p1@LOC100132354
Hg19::chr7:130418367..130418376+电话:chr7:130418367..130418376
+
Hg19::chr7:130418395.130418402+电话:chr7:130418395..130418402
+
Hg19::chr7:157794309..157794344-电话:chr7:157794309..157794344
-
Hg19::chr7:17978865..17978889-电话:chr7:17978865..17978889
-
Hg19::chr7:17979403..17979425+电话:chr7:17979403..17979425
+
Hg19::chr7:17980054..17980065-第3页@SNX13
Hg19::chr7:18125931..18125935+电话:chr7:18125931..18125935
+
Hg19::chr7:18126240..18126298+第15页@HDAC9
Hg19::chr7:18126442..18126465+第9页@HDAC9
Hg19::chr7:18126557..18126641+第6页@HDAC9
Hg19::chr7:18127565..18127576+p1@ENST00000455069
Hg19::chr7:18206831..18206833+电话:chr7:18206831..18206833
+
Hg19::chr7:18247180..18247182+p@基督7:18247180..18247182
+
Hg19::chr7:18390519..18390547+电话:chr7:18390519..18390547
+
Hg19::chr7:18535224..18535233+第41页@HDAC9
Hg19::chr7:18535300..18535311+第20页@HDAC9
Hg19::chr7:18535321..18535343+第7页@HDAC9
Hg19::chr7:18575650..18575653-电话:chr7:18575650..18575653
-
Hg19::chr7:18587136..18587138+电话:chr7:18587136..18587138
+
Hg19::chr7:18624926..18624945+电话:chr7:18624926..18624945
+
Hg19::chr7:18625020..18625033+电话:chr7:18625020..18625033
+
Hg19::chr7:18668902..18668905+邮政编码:7:18668902.18668905
+
Hg19::chr7:18672094..18672104+电话:chr7:18672094..18672104
+
Hg19::chr7:18687532..18687536+电话:chr7:18687532..18687536
+
Hg19::chr7:27224021..27224026+第17页@HOXA11-AS1
Hg19::chr7:27282174..27282223-p1@ENST00000519050
Hg19::chr7:27282385..27282394+p3@电动车辆1
Hg19::chr7:27903656..27903678-第11页@JAZF1
Hg19::chr7:29233305..29233342+电话:chr7:29233305..29233342
+
Hg19::chr7:29334902..29334911+电话:chr7:29334902..29334911
+
Hg19::chr7:73140837..73140841-电话:chr7:73140837..73140841
-
Hg19::chr7:75909929..75909966+电话:chr7:75909929..75909966
+
Hg19::chr7:75910322..75910332+电话:chr7:75910322..75910332
+
Hg19::chr8:108266644..108266647-电话:chr8:108266644..108266647
-
Hg19::chr8:108323457..108323466-电话:chr8:108323457..108323466
-
Hg19::chr8:108323495..108323502-电话:chr8:108323495..108323502
-
Hg19::chr8:108323562..108323573-电话:chr8:108323562..108323573
-
Hg19::chr8:108323707..108323711-电话:chr8:108323707..108323711
-
Hg19::chr8:108324027..108324036-电话:chr8:108324027..108324036
-
Hg19::chr8:108446884.108446900-电话:chr8:108446884..108446900
-
Hg19::chr8:108509590..108509613-p6@ANGPT1
Hg19::chr8:108509895..108509902-p16@角度1
Hg19::chr8:108510224..108510248-p3@角度1
Hg19::chr8:123583818..123583821-电话:chr8:123583818..123583821
-
Hg19::chr8:20040601..20040630-p2@SLC18A1
Hg19::chr8:20040638..20040652-p1@SLC18A1
Hg19::chr8:20472433..20472439-p1@ENST00000516135
Hg19::chr8:38399534..38399540-电话:chr8:38399534..38399540
-
Hg19::chr8:38411258..38411272-电话:chr8:38411258..38411272
-
Hg19::chr8:49730848..49730871+电话:chr8:49730848..49730871
+
Hg19::chr8:6698718..6698744+电话:6698718.6698744
+
Hg19::chr8:6817717..6817731-第1页@DEFA9P
Hg19::chr8:6887048..6887055-p1@DEFA11P
Hg19::chr8:6897005..6897008-第1页@DEFA7P
Hg19::chr8:6914153..6914160-第2页@DEFA5
Hg19::chr9:73778694..73778720-电话:chr9:73778694..73778720
-
Hg19::chr9:73829940..73829948-电话:chr9:73829940..73829948
-
Hg19::chr9:73881874..73881877-电话:chr9:73881874..73881877
-
Hg19::chr9:73893947..73893951-电话:chr9:73893947..73893951
-
Hg19::chr9:73894992..73894993-p@基督:73894992..73894993
-
Hg19::chr9:73947041..73947056-电话:chr9:73947041..73947056
-
Hg19::chr9:73947245..73947253-电话:chr9:73947245..73947253
-
Hg19::chr9:74062623..74062652-电话:chr9:74062623..74062652
-
Hg19::chr9:74062701.74062711-电话:chr9:74062701..74062711
-
Hg19::chr9:74167593..74167609-p@chr9:74167593..74167609
-
Hg19::chr9:74167667..74167687-电话:chr9:74167667…74167687
-
Hg19::chr9:74167724..74167739-电话:chr9:74167724..74167739
-
Hg19::chr9:74167989..74167992-电话:chr9:74167989…74167992
-
Hg19::chr9:74384373..74384388-电话:chr9:74384373..74384388
-


此共表达簇上的丰富路径<b>摘要:典型路径基因集是从Reactome、Wikipathys和KEGG中编译而来的。对于主要的信号通路,转录调控基因(下游靶点)是从Netpath获得的。综合起来,典型途径和下游靶点总计489个人类基因集。利用同源基因数据库通过同源性推断出相应的小家鼠基因集。通过超几何概率评估共表达簇中包括的489个经典途径和基因集中的每一个的富集度。然后,采用Benjamini-Hochberg方法对所得P值进行调整,以进行多重比较<br><b>分析师:Emmanuel Dimont链接到源数据集数据


此共表达无结果

此共表达簇上的丰富基因本体术语<b>摘要:共表达簇的GOStat分析结果。使用GOStat(PMID:14962934)和默认参数对启动子映射到至少两个不同基因的每个簇进行分析<br><b>分析师:Erik Arner链接到源数据集数据


GO标识GO名称FDR校正的p值
GO:0016481号转录的负调控0.00569544948163178
GO:0045934号碱基、核苷、核苷酸和核酸代谢过程的负调控0.00569544948163178
电话:0031324细胞代谢过程的负调控0.00755964970404332
去:0009892代谢过程的负调控0.00952977996252333
GO:0016564号转录抑制活性0.0151647357180119
去:0007275多细胞生物发育0.0151647357180119
GO:0048523号细胞过程的负调控0.0157689292058636
去:0006355转录调控,依赖于DNA0.0157689292058636
去:0004363谷胱甘肽合成酶活性0.0157689292058636
GO:0048519号生物过程的负调控0.0157689292058636
去:0006351转录,依赖于DNA0.0157689292058636
去:0032774RNA生物合成过程0.0157689292058636
GO:0045449号转录调控0.021642745754459
GO:0019219号碱基、核苷、核苷酸和核酸代谢过程的调控0.0223548243104183
转到:0006350转录0.0241386646810479
GO:0010468号基因表达调控0.0241386646810479
GO:0042742号细菌的防御反应0.0254107438310059
GO:0031323号细胞代谢过程的调控0.0254107438310059
通过:0003700转录因子活性0.0261464457060413
去:0009617对细菌的反应0.0261464457060413
去:0003714转录辅抑制活性0.0261464457060413
去:0006357RNA聚合酶II启动子转录调控0.0261464457060413
去:0008134转录因子结合0.0261464457060413
GO:0019222号代谢过程的调节0.0261464457060413
GO:0016070编号RNA代谢过程0.0261464457060413
转到:0005497雄激素结合0.0263168210860954
GO:0048731号系统开发0.0263168210860954
GO:0044451号核质部分0.0263168210860954
GO:0000122号RNA聚合酶II启动子转录的负调控0.0271229937447896
去:0032502发展过程0.0281826313299467
去:0008504单胺跨膜转运蛋白活性0.0281826313299467
去:0005515蛋白质结合0.0295470862423253
GO:0015844号单胺转运0.0310627333598091
去:0065007生物调节0.0310627333598091
去:0005654核质0.0310627333598091
去:0050794细胞过程的调节0.0350130822848958
GO:0045843号横纹肌发育的负调控0.0367532869569296
去:0006750谷胱甘肽生物合成过程0.0367532869569296
去:0006952防御反应0.0386664540593856
GO:0042221号对化学刺激的反应0.0386664540593856
GO:0017053号转录抑制复合物0.0425549775703636
去:0032501多细胞生物过程0.0425615836320144
GO:0048856号解剖结构发育0.0427035378600283
去:0006366RNA聚合酶II启动子转录0.0427035378600283
GO:0045892号转录负调控,依赖于DNA0.0427035378600283
GO:0051707号对其他生物的反应0.0427035378600283
GO:0050789号生物过程调节0.0427035378600283
去:0005667转录因子复合物0.0427035378600283
GO:0050832号对真菌的防御反应0.0427035378600283
GO:0016202号横纹肌发育的调节0.0451811701326321
GO:0045893号转录的正调控,依赖于DNA0.0451811701326321
GO:0031981号核腔0.0451811701326321
GO:0050821号蛋白质稳定化0.0451811701326321
电话:0016566特异性转录抑制活性0.0451811701326321
去:0007417中枢神经系统发育0.0472137525682012
去:0007399神经系统发育0.0472205833852633



此共同表达集群上的丰富示例本体术语<b>摘要:</b>为了总结1000个样本中的启动子活性(TSS区域的表达谱),我们基于FANTOM5样本本体(FF本体)进行了富集分析。这里的问题是“在哪种类型的样本中启动子更活跃”。为了回答这个问题,我们使用Mann-Whitney秩和检验比较了与样本本体术语相关的样本和其余样本中的表达式(TPM)。为了总结在这个共表达集群中丰富的本体,我们对组成的所有启动子的平均表达谱进行了相同的分析<b> 分析师:Hideya Kawaji链接到源数据集疾病数据<br>


疾病
本体术语p值n个
胃肠系统癌1.43e-15号机组14


此共表达簇上过度表达的TFBS(DNA)基序<b>摘要:</b>显示的值是该共表达簇中基序过度表达的p值。因此,较小的p值意味着强烈的过度代表性<b> 分析师:Michiel de Hoon链接到源数据数据<br><br>茉莉花图案<br>数据


新颖的图案



JASPAR图案

Motifs公司-log10(p值)
MA0003.1号机组7.69492e-11号
MA0004.1号机组0.159109
MA0006.1号机组0.0276228
MA0007.1号机组0.00758216
MA0009.1号机组0.230395
MA0014.1号0.000257282
MA0017.1号0.407385
MA0019.1号0.280616
MA0024.1号机组0.00834808
MA0025.1号文件0.0508445
MA0027.1号机组1.17088
MA0028.1号机组2008年5月29日-05日
MA0029.1号机组0.283019
MA0030.1型1.00467
MA0031.1号文件0.509526
电话0038.11.58106
MA0040.1型0.49966
MA0041.1号0.418658
MA0042.1号0.0800612
MA0043.1号0.230781
MA0046.1号1.00819
MA0048.1号0.00214898
马0050.10.0439313
MA0051.1号0.0516032
MA0052.1号2.81862
MA0055.1号1.34265
马0056.10
MA0057.1号0.169929
MA0058.1号0.101998
MA0059.1号0.680448
马0060.10.100572
MA0061.1号0.120245
MA0063.1号0
MA0066.1号0.108255
MA0067.1号0.120593
MA0068.1号0.195194
马0069.10.409295
MA0070.1号0.199806
MA0071.1号1.02283
MA0072.1号0.935637
MA0073.1号0.157071
MA0074.1号0.178554
MA0076.1号0.000105735
MA0077.1号1.26265
MA0078.1号0.146979
MA0081.1号0.100104
MA0083.1号0.0222755
MA0084.1号1.85487
MA0087.1号1.69669
MA0088.1号0.00218164
马0089.10
MA0090.1号0.0620445
MA0091.1号机组1.03551
MA0092.1号0.768585
MA0093.1号0.123166
马0095.10
马0098.10
MA0100.1型0.88216
MA0101.1号机组0.0869499
MA0103.1号1.38985
MA0105.1号0.00256899
MA0106.1号0.0875563
MA0107.1号0.126741
MA0108.2号1.7051
MA0109.1号0
MA0111.1号0.515491
MA0113.1号0.0481672
MA0114.1号0.278683
MA0115.1号1.52825
MA0116.1号0.000264579
MA0117.1号0.115848
马0119.12.20539
MA0122.1号机组0.133843
MA0124.1号机组0.537011
MA0125.1号机组1.07668
MA0130.1号机组0
马0131.10.0858033
MA0132.1号机组0
MA0133.1号机组0
MA0135.1号机组1.16789
MA0136.1号机组0.0254218
MA0139.1号0.0821274
MA0140.1号机组0.439295
MA0141.1号1.64345
MA0142.1号0.257899
MA0143.1号0.190264
MA0144.1号机组0.0342575
MA0145.1号0.0354926
MA0146.1号5.51049电子05
MA0147.1号0.14738
MA0148.1号1.20881
MA0149.1号3.44287
MA0062.2号1.06191e-08号
MA0035.2号1.0004
MA0039.2号4.59423电子-06
MA0138.2号机组0.411
MA0002.2号机组0.0206252
马0137.20.428733
MA0104.2号0.135412
MA0047.2号0.96816
MA0112.2号0.0724126
MA0065.2号0.117626
MA0150.1号机组0.006191
MA0151.1号0
MA0152.1号0.324961
MA0153.1号机组0.367106
MA0154.1号机组0.144725
MA0155.1号0.131308
MA0156.1号机组7.36716e-05年
MA0157.1号0.356399
MA0158.1号0
MA0159.1号机组0.203928
MA0160.1号0.506519
MA0161.1号机组0
MA0162.1号机组6.87494电子05
MA0163.1号机组0.0021058
MA0164.1号机组1.51769
MA0080.2号0.00138785
马0018.20.0403392
MA0099.2号机组0.0717401
MA0079.2号1942年1月19日至2006年
MA0102.2号机组0.247412
马0258.10.170987
马0259.10.495412
马0442.10



ENCODE TF ChIP-seq峰富集分析<b>摘要:</b>对于每个TF和每个共表达簇,使用Fisher精确检验将带有ENCODE TF ChIP信号的启动子数量与稳健集的其他启动子进行比较。Benjamini-Hochberg校正后,保留了ChIP显著富集(q<=0.05)的聚类<br><b>分析师:Erik Arner链接到源数据集数据


没有此群集的分析结果

共表达簇的相对表达<b>总结:</b>将共表达簇与FANTOM5样本进行比较,以获得相对表达<br><b>分析师:不适用<br><br>链接到数据源数据